Compare revisions

a2c5d6c2 · a2c5d6c2 · a2c5d6c2 · ceca3ce0 · ceca3ce0 · ceca3ce0
--- a/src/nf_modules/cutadapt/trimming_paired.nf
+++ b/src/nf_modules/cutadapt/trimming_paired.nf
--- a/src/nf_modules/cutadapt/trimming_single.config
+++ b/src/nf_modules/cutadapt/trimming_single.config
--- a/src/nf_modules/cutadapt/trimming_single.nf
+++ b/src/nf_modules/cutadapt/trimming_single.nf
--- a/src/nf_modules/danpos/main.nf
+++ b/src/nf_modules/danpos/main.nf
--- a/src/nf_modules/deeptools/main.nf
+++ b/src/nf_modules/deeptools/main.nf
--- a/src/nf_modules/emase-zero/main.nf
+++ b/src/nf_modules/emase-zero/main.nf
--- a/src/nf_modules/emase/main.nf
+++ b/src/nf_modules/emase/main.nf
--- a/src/nf_modules/fastp/main.nf
+++ b/src/nf_modules/fastp/main.nf
--- a/src/nf_modules/fastq_screen/main.nf
+++ b/src/nf_modules/fastq_screen/main.nf
--- a/src/nf_modules/fastqc/main.nf
+++ b/src/nf_modules/fastqc/main.nf
--- a/src/nf_modules/flexi_splitter/main.nf
+++ b/src/nf_modules/flexi_splitter/main.nf
--- a/src/nf_modules/flexi_splitter/marseq_flexi_splitter.yaml
+++ b/src/nf_modules/flexi_splitter/marseq_flexi_splitter.yaml
--- a/src/nf_modules/flexi_splitter/toy_file_paired.yaml
+++ b/src/nf_modules/flexi_splitter/toy_file_paired.yaml
--- a/src/nf_modules/g2gtools/main.nf
+++ b/src/nf_modules/g2gtools/main.nf
--- a/src/nf_modules/gatk3/main.nf
+++ b/src/nf_modules/gatk3/main.nf
--- a/src/nf_modules/gatk4/main.nf
+++ b/src/nf_modules/gatk4/main.nf
--- a/src/nf_modules/gffread/main.nf
+++ b/src/nf_modules/gffread/main.nf
--- a/src/nf_modules/guppy-cpu/main.nf
+++ b/src/nf_modules/guppy-cpu/main.nf
--- a/src/nf_modules/guppy-gpu/main.nf
+++ b/src/nf_modules/guppy-gpu/main.nf
--- a/src/nf_modules/hisat2/main.nf
+++ b/src/nf_modules/hisat2/main.nf
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