Compare revisions

2c488dbf · 2c488dbf · 2c488dbf · 2c488dbf · 2c488dbf · 2c488dbf
--- a/src/nf_modules/SRAtoolkit/2.8.2/docker_init.sh
+++ b/src/nf_modules/SRAtoolkit/2.8.2/docker_init.sh
--- a/src/nf_modules/Salmon/0.8.2/docker_init.sh
+++ b/src/nf_modules/Salmon/0.8.2/docker_init.sh
--- a/src/nf_modules/TopHat/2.1.1/Dockerfile
+++ b/src/nf_modules/TopHat/2.1.1/Dockerfile
--- a/src/nf_modules/TopHat/2.1.1/docker_init.sh
+++ b/src/nf_modules/TopHat/2.1.1/docker_init.sh
--- a/src/nf_modules/Trimmomatic/0.36/docker_init.sh
+++ b/src/nf_modules/Trimmomatic/0.36/docker_init.sh
--- a/src/nf_modules/UrQt/d62c1f8/docker_init.sh
+++ b/src/nf_modules/UrQt/d62c1f8/docker_init.sh
--- a/src/nf_modules/agat/main.nf
+++ b/src/nf_modules/agat/main.nf
--- a/src/nf_modules/alntools/main.nf
+++ b/src/nf_modules/alntools/main.nf
--- a/src/nf_modules/beagle/main.nf
+++ b/src/nf_modules/beagle/main.nf
--- a/src/nf_modules/bedtools/main.nf
+++ b/src/nf_modules/bedtools/main.nf
--- a/src/nf_modules/bioawk/main.nf
+++ b/src/nf_modules/bioawk/main.nf
--- a/src/nf_modules/bioconvert/main.nf
+++ b/src/nf_modules/bioconvert/main.nf
--- a/src/nf_modules/bowtie/main.nf
+++ b/src/nf_modules/bowtie/main.nf
--- a/src/nf_modules/bowtie2/main.nf
+++ b/src/nf_modules/bowtie2/main.nf
--- a/src/nf_modules/bwa/main.nf
+++ b/src/nf_modules/bwa/main.nf
--- a/src/nf_modules/canu/1.6/docker_init.sh
+++ b/src/nf_modules/canu/1.6/docker_init.sh
--- a/src/nf_modules/cellphonedb/main.nf
+++ b/src/nf_modules/cellphonedb/main.nf
--- a/src/nf_modules/cutadapt/1.14/docker_init.sh
+++ b/src/nf_modules/cutadapt/1.14/docker_init.sh
--- a/src/nf_modules/cutadapt/cutadapt.config
+++ b/src/nf_modules/cutadapt/cutadapt.config
--- a/src/nf_modules/cutadapt/cutadapt.nf
+++ b/src/nf_modules/cutadapt/cutadapt.nf
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