src/Dockerfile

+FROM rocker/tidyverse
+
+RUN apt-get update \
+    && apt-get install -y \
+    libxt6 \
+    cargo
+
+RUN Rscript -e "install.packages('rmdformats')"
+
+#session 1
+RUN Rscript -e "install.packages('rvest')"
+RUN Rscript -e "install.packages('remotes'); remotes::install_github('rlesur/klippy')"
+
+#session 3
+RUN Rscript -e "install.packages('gganimate')"
+RUN Rscript -e "install.packages('gifski')"
+RUN Rscript -e "install.packages('openxlsx')"
+
+#session4
+RUN Rscript -e "install.packages(c('ghibli', 'nycflights13','viridis','ggrepel'))"
\ No newline at end of file

src/create_docker_to_deploy_the_course.sh

+#!/bin/bash
+
+set -euo pipefail +o nounset
+
+
+TAG="v2022"
+
+IMAGE_NAME="r_for_beginners"
+DOCKERFILE_DIR="."
+
+REPO=carinerey/$IMAGE_NAME
+
+echo "## Build docker: $REPO:$TAG ##"
+docker build -t $REPO:$TAG $DOCKERFILE_DIR
+echo "## Build docker: $REPO ##"
+docker build -t $REPO $DOCKERFILE_DIR
+
+if [[ $1 == "push_yes" ]]
+then
+    echo "## Push docker ##"
+    docker push $REPO:$TAG
+    docker push $REPO
+fi

src/create_users_from_mail.sh

@@ -7,9 +7,9 @@ USERMAILS=$@
 for USERMAIL in ${USERMAILS[@]}
 do
   USERNAME=$(echo ${USERMAIL} | sed -E 's/(.*)@.*/\1/')
-  adduser ${USERNAME} --gecos 'First Last,RoomNumber,WorkPhone,HomePhone' --disabled-password
+  adduser ${USERNAME} --gecos 'First Last,RoomNumber,WorkPhone,HomePhone' --disabled-password --force-badname > /dev/null
   PASSWD=$(openssl rand -base64 10)
-  echo "${USERNAME}:${PASSWD}" | chpasswd
+  echo "${USERNAME}:${PASSWD}" | chpasswd > /dev/null
   echo "======================================================================="
   echo "${USERMAIL}:"
   echo "${USERNAME}"

src/create_users_from_user_list_csv.sh

+#! /usr/bin/bash
+
+# USAGE
+# wget https://gitbio.ens-lyon.fr/can/R_basis/-/raw/main/src/create_users_from_user_list_csv.sh
+# upload r_user_list_<day_number>_<day>.csv from your computer to the rstudio server
+# sudo bash create_users_from_user_list_csv.sh r_user_list_<day_number>_<day>.csv
+
+USER_PASSWORD_FILENAME=$@
+while IFS=';' read -r NAME SURNAME EMAIL LAB COMMENT STATUS USERNAME PASSWD ; do
+  if [[ $EMAIL =~ "@" ]]
+  then
+    echo "=========================================="
+    echo user: $NAME $SURNAME $EMAIL $LAB
+    echo r_login: $USERNAME
+    echo r_passwd: $PASSWD
+    
+    adduser ${USERNAME} --gecos 'First Last,RoomNumber,WorkPhone,HomePhone' --disabled-password --force-badname > /dev/null
+    echo "${USERNAME}:${PASSWD}" | chpasswd > /dev/null
+  fi
+done < $USER_PASSWORD_FILENAME
+
+echo "=========================================="

src/create_users_from_user_pwd_list.sh

+#! /usr/bin/bash
+
+# USAGE
+# wget https://gitbio.ens-lyon.fr/can/R_basis/-/raw/master/src/create_users_from_user_pwd_list.sh
+# upload X_user_pwd_list.tsv from your computer to the rstudio server
+# sudo bash create_users_from_user_pwd_list.sh X_user_pwd_list.tsv
+
+USER_PASSWORD_FILENAME=$@
+while IFS=$'\t' read -r GROUPE NAME SURNAME MAIL LOGIN_CBP PASSWD_CBP LABO R_USERNAME R_PASSWD ; do
+  if [[ $MAIL =~ "@" ]]
+  then
+    echo "=========================================="
+    echo user: $NAME $SURNAME $MAIL $LABO group:$GROUPE
+    if ! [[ $GROUPE =~ "L" ]]
+    then 
+        echo computer_login: $LOGIN_CBP
+        echo computer_passwd: $PASSWD_CBP
+    else 
+        echo computer_login: "TP"
+        echo computer_passwd: 
+    fi
+    echo r_login: $R_USERNAME
+    echo r_passwd: $R_PASSWD
+    
+    adduser ${R_USERNAME} --gecos 'First Last,RoomNumber,WorkPhone,HomePhone' --disabled-password --force-badname > /dev/null
+    echo "${R_USERNAME}:${R_PASSWD}" | chpasswd > /dev/null
+  fi
+done < $USER_PASSWORD_FILENAME
+
+echo "=========================================="
\ No newline at end of file

src/style.css → www/style_Rmd.css

@@ -16,11 +16,11 @@ html, body {
 
 @font-face {
     font-family: 'Yanone Kaffeesatz';
-    src:url("../src/YanoneKaffeesatz-Bold.ttf");
+    src:url("../www/YanoneKaffeesatz-Bold.ttf");
 }
 @font-face {
     font-family: 'Raleway';
-    src:url("../src/Raleway-Regular.ttf");
+    src:url("../www/Raleway-Regular.ttf");
 }
 
 @import url('https://fonts.googleapis.com/css2?family=Yanone+Kaffeesatz&display=swap');