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man/getTidyGlmmTMB.Rd
man/getValidDispersion.Rd
man/get_effects_from_rnorm.Rd
man/get_eval_data.Rd
man/get_eval_data_from_dds.Rd
man/get_eval_data_from_ltmb.Rd
man/get_inference_dds.Rd
man/get_label_y_position.Rd
man/get_mad_left_threshold.Rd
man/get_mad_user_message.Rd
man/get_messages_sequencing_depth.Rd
man/get_metrics_2plot.Rd
man/get_ml_metrics_obj.Rd
man/get_performances_metrics_obj.Rd
man/get_pr_curve.Rd
man/get_pr_object.Rd
man/get_roc_curve.Rd
man/get_roc_object.Rd
man/get_scaling_factor.Rd
man/glance_tmb.Rd
man/group_logQij_per_genes_and_labels.Rd
man/handleAnovaError.Rd
man/identifyTopFit.Rd
man/inferenceToExpected_withFixedEff.Rd
man/inferenceToExpected_withMixedEff.Rd
man/init_variable.Rd
man/inputs_checking.Rd
man/isValidEvalInput.Rd
man/isValidExpression.Rd
man/isValidGlmmTmb.Rd
man/isValidInput2fit.Rd
man/isValidList_tmb.Rd
man/isValidMock_obj.Rd
man/is_dispersionMatrixValid.Rd
man/is_formula_mixedTypeI.Rd
man/is_fullrank.Rd
man/is_mixedEffect_inFormula.Rd
man/is_positive_definite.Rd
man/is_truthLabels_valid.Rd
man/is_validGroupBy.Rd
man/join_dtf.Rd
man/launchFit.Rd
man/launchUpdate.Rd
man/medianRatioNormalization.Rd
man/mock_rnaseq.Rd
man/parallel_fit.Rd
man/parallel_update.Rd
man/performance-class.Rd
man/performance.Rd
man/pipe.Rd
man/precision.Rd
man/prediction-class.Rd
man/prediction.Rd
man/prepareData2computeInteraction.Rd
man/prepareData2fit.Rd
man/prepare_dataParallel.Rd
man/rbind_evaldata_tmb_dds.Rd
man/rbind_model_params_and_dispersion.Rd
man/recall.Rd
man/relevel_list_tmb_frame.Rd
man/relevelling_factors.Rd
man/removeDigitsAtEnd.Rd
man/removeDuplicatedWord.Rd
man/renameColumns.Rd
man/reorderColumns.Rd
man/replaceReferenceEffectBy0.Rd
man/replicateByGroup.Rd
man/replicateMatrix.Rd
man/replicateRows.Rd
man/rmse.Rd
man/samplingFromMvrnorm.Rd
man/scaleCountsTable.Rd
man/sensitivity.Rd
man/set_correlation.Rd
man/specificity.Rd
man/subsetByTermLabel.Rd
man/subsetFixEffectInferred.Rd
man/subsetGenes.Rd
man/subset_glance.Rd
man/tidy_results.Rd
man/tidy_tmb.Rd
man/trimmedMeanMvaluesNormalization.Rd
man/updateParallel.Rd
man/wald_test.Rd
man/warning_too_low_mu_ij_row.Rd
man/wrap_dds.Rd
man/wrapper_var_cor.Rd