From f3591b544a3fc9d8a4a0afdcbe59aed75dd8f5d5 Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent.modolo@ens-lyon.fr> Date: Mon, 20 May 2019 18:04:21 +0200 Subject: [PATCH] singularity modules: fix typo in .def files --- src/singularity_modules/bcftools/1.7/bcftools.def | 2 +- src/singularity_modules/bedtools/2.25.0/bedtools.def | 2 +- src/singularity_modules/bioawk/1.0/bioawk.def | 2 +- src/singularity_modules/bowtie/1.2.2/bowtie.def | 2 +- src/singularity_modules/bowtie2/2.3.4.1/bowtie2.def | 2 +- src/singularity_modules/bwa/0.7.17/bwa.def | 2 +- src/singularity_modules/canu/1.6/canu.def | 2 +- src/singularity_modules/cutadapt/1.14/cutadapt.def | 2 +- src/singularity_modules/cutadapt/1.15/cutadapt.def | 2 +- src/singularity_modules/cutadapt/2.1/cutadapt.def | 2 +- src/singularity_modules/deeptools/3.0.2/deeptools.def | 2 +- src/singularity_modules/deeptools/3.1.1/deeptools.def | 2 +- src/singularity_modules/fastqc/0.11.5/fastqc.def | 2 +- src/singularity_modules/file_handle/0.1.1/file_handle.def | 2 +- src/singularity_modules/gatk/4.0.8.1/gatk.def | 2 +- src/singularity_modules/hisat2/2.0.0/hisat2.def | 2 +- src/singularity_modules/hisat2/2.1.0/hisat2.def | 2 +- src/singularity_modules/htseq/0.11.2/htseq.def | 2 +- src/singularity_modules/htseq/0.8.0/htseq.def | 2 +- src/singularity_modules/kallisto/0.43.1/kallisto.def | 2 +- src/singularity_modules/kallisto/0.44.0/kallisto.def | 2 +- src/singularity_modules/macs2/2.1.2/macs2.def | 2 +- src/singularity_modules/multiqc/1.0/multiqc.def | 2 +- src/singularity_modules/multiqc/1.7/multiqc.def | 2 +- src/singularity_modules/music/6613c53/music.def | 2 +- src/singularity_modules/picard/2.18.11/picard.def | 2 +- src/singularity_modules/pigz/2.4/pigz.def | 2 +- src/singularity_modules/rsem/1.3.0/rsem.def | 2 +- src/singularity_modules/salmon/0.8.2/salmon.def | 2 +- src/singularity_modules/sambamba/0.6.7/sambamba.def | 2 +- src/singularity_modules/sambamba/0.6.9/sambamba.def | 2 +- src/singularity_modules/samblaster/0.1.24/samblaster.def | 2 +- src/singularity_modules/samtools/1.7/samtools.def | 2 +- src/singularity_modules/sratoolkit/2.8.2/sratoolkit.def | 2 +- src/singularity_modules/tophat/2.1.1/tophat.def | 2 +- src/singularity_modules/trimmomatic/0.36/trimmomatic.def | 2 +- src/singularity_modules/ucsc/375/ucsc.def | 2 +- src/singularity_modules/umi_tools/1.0.0/umi_tools.def | 2 +- src/singularity_modules/urqt/d62c1f8/urqt.def | 2 +- 39 files changed, 39 insertions(+), 39 deletions(-) diff --git a/src/singularity_modules/bcftools/1.7/bcftools.def b/src/singularity_modules/bcftools/1.7/bcftools.def index bf61726..be53f07 100644 --- a/src/singularity_modules/bcftools/1.7/bcftools.def +++ b/src/singularity_modules/bcftools/1.7/bcftools.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch BCFTOOLS_VERSION=1.7 PACKAGES=bcftools=${BCFTOOLS_VERSION}* diff --git a/src/singularity_modules/bedtools/2.25.0/bedtools.def b/src/singularity_modules/bedtools/2.25.0/bedtools.def index 5bf1e2d..4078e8e 100644 --- a/src/singularity_modules/bedtools/2.25.0/bedtools.def +++ b/src/singularity_modules/bedtools/2.25.0/bedtools.def @@ -4,7 +4,7 @@ From: ubuntu:16.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch BEDTOOLS_VERSION=2.25.0 PACKAGES=bedtools=${BEDTOOLS_VERSION}* diff --git a/src/singularity_modules/bioawk/1.0/bioawk.def b/src/singularity_modules/bioawk/1.0/bioawk.def index e2b5e76..9bb6946 100644 --- a/src/singularity_modules/bioawk/1.0/bioawk.def +++ b/src/singularity_modules/bioawk/1.0/bioawk.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch BIOAWK_VERSION=1.0 PACKAGES="git \ diff --git a/src/singularity_modules/bowtie/1.2.2/bowtie.def b/src/singularity_modules/bowtie/1.2.2/bowtie.def index 047c3ce..4d6def9 100644 --- a/src/singularity_modules/bowtie/1.2.2/bowtie.def +++ b/src/singularity_modules/bowtie/1.2.2/bowtie.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch BOWTIE_VERSION=1.2.2 SAMTOOLS_VERSION=1.7 diff --git a/src/singularity_modules/bowtie2/2.3.4.1/bowtie2.def b/src/singularity_modules/bowtie2/2.3.4.1/bowtie2.def index 294916e..adf3816 100644 --- a/src/singularity_modules/bowtie2/2.3.4.1/bowtie2.def +++ b/src/singularity_modules/bowtie2/2.3.4.1/bowtie2.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch BOWTIE2_VERSION=2.3.4.1 SAMTOOLS_VERSION=1.7 diff --git a/src/singularity_modules/bwa/0.7.17/bwa.def b/src/singularity_modules/bwa/0.7.17/bwa.def index 1071c4f..074892f 100644 --- a/src/singularity_modules/bwa/0.7.17/bwa.def +++ b/src/singularity_modules/bwa/0.7.17/bwa.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch BWA_VERSION=0.7.17 SAMBLASTER_VERSION=0.1.24 diff --git a/src/singularity_modules/canu/1.6/canu.def b/src/singularity_modules/canu/1.6/canu.def index cd0636a..3b0e23e 100644 --- a/src/singularity_modules/canu/1.6/canu.def +++ b/src/singularity_modules/canu/1.6/canu.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch CANU_VERSION=1.6 PACKAGES=canu=${CANU_VERSION}* diff --git a/src/singularity_modules/cutadapt/1.14/cutadapt.def b/src/singularity_modules/cutadapt/1.14/cutadapt.def index e04cc9a..152cf71 100644 --- a/src/singularity_modules/cutadapt/1.14/cutadapt.def +++ b/src/singularity_modules/cutadapt/1.14/cutadapt.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch CUTADAPT_VERSION=1.14 PACKAGES="bash \ diff --git a/src/singularity_modules/cutadapt/1.15/cutadapt.def b/src/singularity_modules/cutadapt/1.15/cutadapt.def index 113af20..27e284c 100644 --- a/src/singularity_modules/cutadapt/1.15/cutadapt.def +++ b/src/singularity_modules/cutadapt/1.15/cutadapt.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch CUTADAPT_VERSION=1.15 PACKAGES="bash \ diff --git a/src/singularity_modules/cutadapt/2.1/cutadapt.def b/src/singularity_modules/cutadapt/2.1/cutadapt.def index 7390051..0223799 100644 --- a/src/singularity_modules/cutadapt/2.1/cutadapt.def +++ b/src/singularity_modules/cutadapt/2.1/cutadapt.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch CUTADAPT_VERSION=2.1 PACKAGES="bash \ diff --git a/src/singularity_modules/deeptools/3.0.2/deeptools.def b/src/singularity_modules/deeptools/3.0.2/deeptools.def index 09be8f1..586c60a 100644 --- a/src/singularity_modules/deeptools/3.0.2/deeptools.def +++ b/src/singularity_modules/deeptools/3.0.2/deeptools.def @@ -4,7 +4,7 @@ From: debian:stretch %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch DEEPTOOLS_VERSION=3.0.2 PACKAGES="build-essential \ diff --git a/src/singularity_modules/deeptools/3.1.1/deeptools.def b/src/singularity_modules/deeptools/3.1.1/deeptools.def index 1a90319..7bc5798 100644 --- a/src/singularity_modules/deeptools/3.1.1/deeptools.def +++ b/src/singularity_modules/deeptools/3.1.1/deeptools.def @@ -4,7 +4,7 @@ From: debian:stretch %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch DEEPTOOLS_VERSION=3.1.1 PACKAGES="build-essential \ diff --git a/src/singularity_modules/fastqc/0.11.5/fastqc.def b/src/singularity_modules/fastqc/0.11.5/fastqc.def index 3f41449..11d529d 100644 --- a/src/singularity_modules/fastqc/0.11.5/fastqc.def +++ b/src/singularity_modules/fastqc/0.11.5/fastqc.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch FASTQC_VERSION=0.11.5 PACKAGES="fastqc=${FASTQC_VERSION}* \ diff --git a/src/singularity_modules/file_handle/0.1.1/file_handle.def b/src/singularity_modules/file_handle/0.1.1/file_handle.def index 0bcc238..240f876 100644 --- a/src/singularity_modules/file_handle/0.1.1/file_handle.def +++ b/src/singularity_modules/file_handle/0.1.1/file_handle.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch FILE_HANDLE_VERSION=0.1.1 diff --git a/src/singularity_modules/gatk/4.0.8.1/gatk.def b/src/singularity_modules/gatk/4.0.8.1/gatk.def index 4d1111f..c87b5be 100644 --- a/src/singularity_modules/gatk/4.0.8.1/gatk.def +++ b/src/singularity_modules/gatk/4.0.8.1/gatk.def @@ -4,7 +4,7 @@ From: broadinstitute/gatk:4.0.8.1 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch GATK_VERSION=4.0.8.1 diff --git a/src/singularity_modules/hisat2/2.0.0/hisat2.def b/src/singularity_modules/hisat2/2.0.0/hisat2.def index 85b5c64..a4ea94d 100644 --- a/src/singularity_modules/hisat2/2.0.0/hisat2.def +++ b/src/singularity_modules/hisat2/2.0.0/hisat2.def @@ -4,7 +4,7 @@ From: alpine:3.8 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SAMTOOLS_VERSION=1.7 HISAT2_VERSION=2.0.0 diff --git a/src/singularity_modules/hisat2/2.1.0/hisat2.def b/src/singularity_modules/hisat2/2.1.0/hisat2.def index 4f36b97..092d3f0 100644 --- a/src/singularity_modules/hisat2/2.1.0/hisat2.def +++ b/src/singularity_modules/hisat2/2.1.0/hisat2.def @@ -4,7 +4,7 @@ From: alpine:3.8 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SAMTOOLS_VERSION=1.7 HISAT2_VERSION=2.1.0 diff --git a/src/singularity_modules/htseq/0.11.2/htseq.def b/src/singularity_modules/htseq/0.11.2/htseq.def index 34f16ee..76ab6c3 100644 --- a/src/singularity_modules/htseq/0.11.2/htseq.def +++ b/src/singularity_modules/htseq/0.11.2/htseq.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch HTSEQ_VERSION=0.11.2 PACKAGES="build-essential \ diff --git a/src/singularity_modules/htseq/0.8.0/htseq.def b/src/singularity_modules/htseq/0.8.0/htseq.def index 41f33ce..a96643a 100644 --- a/src/singularity_modules/htseq/0.8.0/htseq.def +++ b/src/singularity_modules/htseq/0.8.0/htseq.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch HTSEQ_VERSION=0.8.0 PACKAGES="build-essential \ diff --git a/src/singularity_modules/kallisto/0.43.1/kallisto.def b/src/singularity_modules/kallisto/0.43.1/kallisto.def index 4b3576b..84a452f 100644 --- a/src/singularity_modules/kallisto/0.43.1/kallisto.def +++ b/src/singularity_modules/kallisto/0.43.1/kallisto.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch KALLISTO_VERSION=0.43.1 PACKAGES="curl \ diff --git a/src/singularity_modules/kallisto/0.44.0/kallisto.def b/src/singularity_modules/kallisto/0.44.0/kallisto.def index b82ea3b..74ead1b 100644 --- a/src/singularity_modules/kallisto/0.44.0/kallisto.def +++ b/src/singularity_modules/kallisto/0.44.0/kallisto.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch KALLISTO_VERSION=0.44.0 diff --git a/src/singularity_modules/macs2/2.1.2/macs2.def b/src/singularity_modules/macs2/2.1.2/macs2.def index 5e31e46..05003a3 100644 --- a/src/singularity_modules/macs2/2.1.2/macs2.def +++ b/src/singularity_modules/macs2/2.1.2/macs2.def @@ -2,7 +2,7 @@ Bootstrap: docker From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch MACS_VERSION=2.1.2 diff --git a/src/singularity_modules/multiqc/1.0/multiqc.def b/src/singularity_modules/multiqc/1.0/multiqc.def index 4ca06cc..8a24de7 100644 --- a/src/singularity_modules/multiqc/1.0/multiqc.def +++ b/src/singularity_modules/multiqc/1.0/multiqc.def @@ -4,7 +4,7 @@ From: debian:stretch %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch MULTIQC_VERSION=1.0 PACKAGES="build-essential \ diff --git a/src/singularity_modules/multiqc/1.7/multiqc.def b/src/singularity_modules/multiqc/1.7/multiqc.def index 7ca4367..b583428 100644 --- a/src/singularity_modules/multiqc/1.7/multiqc.def +++ b/src/singularity_modules/multiqc/1.7/multiqc.def @@ -4,7 +4,7 @@ From: debian:stretch %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch MULTIQC_VERSION=1.7 PACKAGES="build-essential \ diff --git a/src/singularity_modules/music/6613c53/music.def b/src/singularity_modules/music/6613c53/music.def index 4903752..2d16c13 100644 --- a/src/singularity_modules/music/6613c53/music.def +++ b/src/singularity_modules/music/6613c53/music.def @@ -4,7 +4,7 @@ From: alpine:3.8 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch MUSIC_VERSION=6613c53 SAMTOOLS_VERSION=1.7 diff --git a/src/singularity_modules/picard/2.18.11/picard.def b/src/singularity_modules/picard/2.18.11/picard.def index caaa961..3ee5418 100644 --- a/src/singularity_modules/picard/2.18.11/picard.def +++ b/src/singularity_modules/picard/2.18.11/picard.def @@ -7,7 +7,7 @@ src/singularity_modules/picard/2.18.11/PicardCommandLine /usr/bin/ %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch PICARD_VERSION=2.18.11 PACKAGES="default-jre \ diff --git a/src/singularity_modules/pigz/2.4/pigz.def b/src/singularity_modules/pigz/2.4/pigz.def index ec80710..6a757e2 100644 --- a/src/singularity_modules/pigz/2.4/pigz.def +++ b/src/singularity_modules/pigz/2.4/pigz.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch PIGZ_VERSION=2.4 PACKAGES=pigz=${PIGZ_VERSION}* diff --git a/src/singularity_modules/rsem/1.3.0/rsem.def b/src/singularity_modules/rsem/1.3.0/rsem.def index fa8f79e..4aecc67 100644 --- a/src/singularity_modules/rsem/1.3.0/rsem.def +++ b/src/singularity_modules/rsem/1.3.0/rsem.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch RSEM_VERSION=1.3.0 BOWTIE2_VERSION=2.3.4.1 diff --git a/src/singularity_modules/salmon/0.8.2/salmon.def b/src/singularity_modules/salmon/0.8.2/salmon.def index 94a9a83..ef56beb 100644 --- a/src/singularity_modules/salmon/0.8.2/salmon.def +++ b/src/singularity_modules/salmon/0.8.2/salmon.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SALMON_VERSION=0.8.2 PACKAGES="curl \ diff --git a/src/singularity_modules/sambamba/0.6.7/sambamba.def b/src/singularity_modules/sambamba/0.6.7/sambamba.def index c90c54a..7ec2356 100644 --- a/src/singularity_modules/sambamba/0.6.7/sambamba.def +++ b/src/singularity_modules/sambamba/0.6.7/sambamba.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SAMBAMBA_VERSION=0.6.7 PACKAGES="curl=7.58.0* \ diff --git a/src/singularity_modules/sambamba/0.6.9/sambamba.def b/src/singularity_modules/sambamba/0.6.9/sambamba.def index aa410dd..3222c74 100644 --- a/src/singularity_modules/sambamba/0.6.9/sambamba.def +++ b/src/singularity_modules/sambamba/0.6.9/sambamba.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SAMBAMBA_VERSION=0.6.9 PACKAGES="curl=7.58.0* \ diff --git a/src/singularity_modules/samblaster/0.1.24/samblaster.def b/src/singularity_modules/samblaster/0.1.24/samblaster.def index 0141ec3..57f7c41 100644 --- a/src/singularity_modules/samblaster/0.1.24/samblaster.def +++ b/src/singularity_modules/samblaster/0.1.24/samblaster.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SAMBLASTER_VERSION=0.1.24 PACKAGES="curl \ diff --git a/src/singularity_modules/samtools/1.7/samtools.def b/src/singularity_modules/samtools/1.7/samtools.def index 5ee2c8c..ea295f0 100644 --- a/src/singularity_modules/samtools/1.7/samtools.def +++ b/src/singularity_modules/samtools/1.7/samtools.def @@ -4,7 +4,7 @@ From: alpine:3.8 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SAMTOOLS_VERSION=1.7 PACKAGES="git \ diff --git a/src/singularity_modules/sratoolkit/2.8.2/sratoolkit.def b/src/singularity_modules/sratoolkit/2.8.2/sratoolkit.def index 0e780ea..c7c3e50 100644 --- a/src/singularity_modules/sratoolkit/2.8.2/sratoolkit.def +++ b/src/singularity_modules/sratoolkit/2.8.2/sratoolkit.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch SRATOOLKIT_VERSION=2.8.2 PACKAGES=sra-toolkit=${SRATOOLKIT_VERSION}* diff --git a/src/singularity_modules/tophat/2.1.1/tophat.def b/src/singularity_modules/tophat/2.1.1/tophat.def index 1e3a751..e4697b9 100644 --- a/src/singularity_modules/tophat/2.1.1/tophat.def +++ b/src/singularity_modules/tophat/2.1.1/tophat.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch TOPHAT_VERSION=2.1.1 PACKAGES=tophat=${BOWTIE2_VERSION}* diff --git a/src/singularity_modules/trimmomatic/0.36/trimmomatic.def b/src/singularity_modules/trimmomatic/0.36/trimmomatic.def index c4c1ce2..3281905 100644 --- a/src/singularity_modules/trimmomatic/0.36/trimmomatic.def +++ b/src/singularity_modules/trimmomatic/0.36/trimmomatic.def @@ -4,7 +4,7 @@ From: ubuntu:18.04 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch TRIMMOMATIC_VERSION=0.36 PACKAGES=trimmomatic=${TRIMMOMATIC_VERSION}* diff --git a/src/singularity_modules/ucsc/375/ucsc.def b/src/singularity_modules/ucsc/375/ucsc.def index 9c5220b..d6c764d 100644 --- a/src/singularity_modules/ucsc/375/ucsc.def +++ b/src/singularity_modules/ucsc/375/ucsc.def @@ -4,7 +4,7 @@ From: debian:jessie %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch UCSC_VERSION=375 PACKAGES="apt-utils \ diff --git a/src/singularity_modules/umi_tools/1.0.0/umi_tools.def b/src/singularity_modules/umi_tools/1.0.0/umi_tools.def index dc1c31c..d9ae3e2 100644 --- a/src/singularity_modules/umi_tools/1.0.0/umi_tools.def +++ b/src/singularity_modules/umi_tools/1.0.0/umi_tools.def @@ -4,7 +4,7 @@ From: debian:stretch %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch UMI_TOOLS_VERSION=1.0.0 PACKAGES="bash \ diff --git a/src/singularity_modules/urqt/d62c1f8/urqt.def b/src/singularity_modules/urqt/d62c1f8/urqt.def index 9b62e13..1f59d83 100644 --- a/src/singularity_modules/urqt/d62c1f8/urqt.def +++ b/src/singularity_modules/urqt/d62c1f8/urqt.def @@ -4,7 +4,7 @@ From: debian:9 %labels MAINTAINER Laurent Modolo -%pos +%post mkdir -p /sps /pbs /scratch URQT_VERSION=d62c1f8 PACKAGES="git \ -- GitLab