Unverified Commit c2fad6c0 authored by Laurent Modolo's avatar Laurent Modolo
Browse files

docker_files: fix sambamba

parent d0eb0a93
......@@ -11,7 +11,6 @@ RUN apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean
RUN curl -k -L https://github.com/biod/sambamba/releases/download/v${SAMBAMBA_VERSION}/sambamba_v${SAMBAMBA_VERSION}_linux.tar.bz2 -o sambamba_v${SAMBAMBA_VERSION}_linux.tar.bz2 && \
tar xvjf sambamba_v${SAMBAMBA_VERSION}_linux.tar.bz2 && \
mv sambamba /usr/bin/ && \
rm -R sambamba_v${SAMBAMBA_VERSION}_linux*
RUN curl -k -L https://github.com/biod/sambamba/releases/download/v${SAMBAMBA_VERSION}/sambamba-${SAMBAMBA_VERSION}-linux-static.gz -o sambamba_v${SAMBAMBA_VERSION}_linux.gz && \
gunzip sambamba_v${SAMBAMBA_VERSION}_linux.gz && \
mv sambamba_v${SAMBAMBA_VERSION}_linux /usr/bin/sambamba
docker build src/docker_modules/sambamba/0.6.9 -t 'lbmc/sambamba:0.6.9'
docker build src/.docker_modules/sambamba/0.6.9 -t 'lbmc/sambamba:0.6.9'
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