From db88907fdd4590bac50b28bd2b89fe81f16eb9fa Mon Sep 17 00:00:00 2001
From: aliarifki <aliarifki@outlook.fr>
Date: Tue, 20 Jun 2023 11:54:48 +0200
Subject: [PATCH] Ajout du fichier de configuration pour bassecalling
---
src/nf_modules/ont-guppy/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/nf_modules/ont-guppy/main.nf b/src/nf_modules/ont-guppy/main.nf
index d806d33..5c615eb 100644
--- a/src/nf_modules/ont-guppy/main.nf
+++ b/src/nf_modules/ont-guppy/main.nf
@@ -53,7 +53,7 @@ guppy_basecaller --compress_fastq \
--gpu_runners_per_device ${params.gpu_runners_per_device} \
--num_callers ${params.num_callers} \
--chunks_per_runner ${params.chunks_per_runner} \
- ${params.config_file}
+ -c ${params.config_file}
"""
}
--
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