diff --git a/src/nf_modules/ont-guppy/main.nf b/src/nf_modules/ont-guppy/main.nf index d806d33fafd8563efd0ae7af144375e455363aeb..5c615eb418620709319790bff584c89d734b0dba 100644 --- a/src/nf_modules/ont-guppy/main.nf +++ b/src/nf_modules/ont-guppy/main.nf @@ -53,7 +53,7 @@ guppy_basecaller --compress_fastq \ --gpu_runners_per_device ${params.gpu_runners_per_device} \ --num_callers ${params.num_callers} \ --chunks_per_runner ${params.chunks_per_runner} \ - ${params.config_file} + -c ${params.config_file} """ }