From b94c5d26193f4a7d263839effd46731a93a23feb Mon Sep 17 00:00:00 2001
From: xgrand <xavier.grand@ens-lyon.fr>
Date: Thu, 4 Jul 2024 15:41:01 +0200
Subject: [PATCH] Suppress params.5p_seq because raise error

---
 src/bolero.nf | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/bolero.nf b/src/bolero.nf
index 1f17d71..443b25f 100755
--- a/src/bolero.nf
+++ b/src/bolero.nf
@@ -84,8 +84,8 @@ params.skipBC = true
 params.gpu_mode = false
 params.adapt = "CGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAA"
 params.gsp = "GTGCACACGGTCCGGCAGATG" // "TTAGGCAGAGGTGAAAAAGTTG" // "CGACTGGAGCACGAGGACACTGA"
-params.5p_seq = "ACATGGACTGAAGGAGTAGAAA"
-params.3p_seq = "GGACTCCCCGTCTGTGCCTTCT"
+//params.5p_seq = "ACATGGACTGAAGGAGTAGAAA"
+//params.3p_seq = "GGACTCCCCGTCTGTGCCTTCT"
 params.genome = "/home/xavier/Data/Genome/202201_Full-length_HBV_GTFv3/20230516_HBV_FL_preCore_reference.fasta"
 params.gtf = "/home/xavier/Data/Genome/202201_Full-length_HBV_GTFv3/20230516_GTF_preCore_FL_HBV_XGR.gtf"
 
-- 
GitLab