diff --git a/src/bolero.nf b/src/bolero.nf index aea21e5631faadc6077e804917d4022fea4ce4c2..aef31c37958b5e40509e55fb59e22c665872cf95 100755 --- a/src/bolero.nf +++ b/src/bolero.nf @@ -239,7 +239,6 @@ workflow { concatenate(tuple_sample) } control_basecalling(basecall_fast5_gpu.out.sequencing_summary) - control_bam(basecall_fast5_gpu.out.sequencing_summary.collect(), sort_index_bam.out.indexed_bam) } else { @@ -278,7 +277,7 @@ workflow { hbv_genome(cut_5pRACE.out.fastq_cutadapt, genome.collect()) sort_index_bam(hbv_genome.out.bam) //il faut ajouter une boucle if pour le mode cpu/gpu - //control_bam(ss.collect(), sort_index_bam.out.indexed_bam) + control_bam(basecall_fast5_gpu.out.sequencing_summary.collect(), sort_index_bam.out.indexed_bam) //###################### START POSITIONS #######################