diff --git a/src/nf_modules/ont-guppy/main.nf b/src/nf_modules/ont-guppy/main.nf index f5f89f0b89d965fd88a54d80c20576fe0ffecd28..b3e85df98678ada6acad54be103535384c3a96a3 100644 --- a/src/nf_modules/ont-guppy/main.nf +++ b/src/nf_modules/ont-guppy/main.nf @@ -53,7 +53,7 @@ guppy_basecaller --compress_fastq \ --gpu_runners_per_device ${params.gpu_runners_per_device} \ --num_callers ${params.num_callers} \ --chunks_per_runner ${params.chunks_per_runner} \ - ${params.config_file} + -c ${params.config_file} """ }