From 9b7797adc55c6dc42496e2128facb5d8dc657131 Mon Sep 17 00:00:00 2001
From: xgrand <xavier.grand@ens-lyon.fr>
Date: Tue, 21 Nov 2023 12:18:55 +0100
Subject: [PATCH] bind /scratch to pollux profile in nextflow.config
---
src/nextflow.config | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/nextflow.config b/src/nextflow.config
index b087fb3..0211a1b 100755
--- a/src/nextflow.config
+++ b/src/nextflow.config
@@ -76,7 +76,7 @@ profiles {
pollux {
singularity.enabled = true
singularity.cacheDir = "./bin/"
- singularity.runOptions = "--bind /data,/home"
+ singularity.runOptions = "--bind /data,/home,/scratch"
process {
errorStrategy = 'finish'
memory = '256GB'
--
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