From 83d4a1140fb82c21d5e2b7abfe03e0909b5a0667 Mon Sep 17 00:00:00 2001
From: aliarifki <aliarifki@outlook.fr>
Date: Tue, 18 Jul 2023 10:50:33 +0200
Subject: [PATCH] Correction du CQ bam
---
src/bolero.nf | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)
diff --git a/src/bolero.nf b/src/bolero.nf
index 852617c..aea21e5 100755
--- a/src/bolero.nf
+++ b/src/bolero.nf
@@ -238,7 +238,9 @@ workflow {
.set{tuple_sample}
concatenate(tuple_sample)
}
- //control_basecalling(basecall_fast5_gpu.out.sequencing_summary)
+ control_basecalling(basecall_fast5_gpu.out.sequencing_summary)
+ control_bam(basecall_fast5_gpu.out.sequencing_summary.collect(), sort_index_bam.out.indexed_bam)
+
}
else {
//basecall_fast5_cpu(input)
--
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