diff --git a/src/nf_modules/concatenate/main.nf b/src/nf_modules/concatenate/main.nf index 741d0431ba26d59446fc78140e68722b4ad508db..ab1d15732edc91bd4b4c350b0011b92ab5ebea06 100755 --- a/src/nf_modules/concatenate/main.nf +++ b/src/nf_modules/concatenate/main.nf @@ -19,7 +19,6 @@ process concatenate { script: """ -zcat ${fastq}/*.fastq.gz > merged.fastq -gzip --quiet merged.fastq +cat ${fastq}/*.fastq.gz > merged.fastq.gz """ } \ No newline at end of file