From 361707e9aebb4906252039a7b03591fe1974dab0 Mon Sep 17 00:00:00 2001
From: xgrand <xavier.grand@ens-lyon.fr>
Date: Fri, 4 Aug 2023 16:15:58 +0200
Subject: [PATCH] Modif
src/.docker_modules/r-bolero/1.0/Junctions_NanoSplicer.R
as.data.frame(single_junction) to rbind
---
src/.docker_modules/r-bolero/1.0/Junctions_NanoSplicer.R | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/.docker_modules/r-bolero/1.0/Junctions_NanoSplicer.R b/src/.docker_modules/r-bolero/1.0/Junctions_NanoSplicer.R
index 3b6a147..835a0f9 100644
--- a/src/.docker_modules/r-bolero/1.0/Junctions_NanoSplicer.R
+++ b/src/.docker_modules/r-bolero/1.0/Junctions_NanoSplicer.R
@@ -293,7 +293,7 @@ for (read_id in list_read_multiple) {
multiple_junction <- merge(multiple_junction, df_combinaison, by="id")
-df_SPvariants <- rbind(single_junction, multiple_junction)
+df_SPvariants <- rbind(as.data.frame(single_junction), multiple_junction)
SP_variant_unique <- df_SPvariants %>% select(id, SP_name)
SP_variant_unique <- SP_variant_unique[!duplicated(SP_variant_unique$id),] # distinct(SP_variant_unique, id)
--
GitLab