diff --git a/src/bolero.nf b/src/bolero.nf index 55fda62e412af1547ce173001489dfddb66e15ab..10b213e2c0d2af25f737f6d94eccda744561712e 100755 --- a/src/bolero.nf +++ b/src/bolero.nf @@ -170,7 +170,9 @@ if(!params.skipBC) { } } - +// include { barecode } from "./nf_modules/barecode/main.nf" +include { pycoqc } from "./nf_modules/pycoqc/main.nf" +include { barcoding_cpu } from "./nf_modules/ont-guppy/main.nf" include { control_basecalling } from "./nf_modules/pycoqc/main.nf" include { control_bam } from "./nf_modules/pycoqc/main.nf" include { concatenate } from "./nf_modules/seqkit/main.nf" diff --git a/src/nextflow.config b/src/nextflow.config index a875c043d3caf61e7add727548c82a8ab4561165..870600d397a439537bfda328ba22aa4dffc4475d 100755 --- a/src/nextflow.config +++ b/src/nextflow.config @@ -146,7 +146,7 @@ profiles { singularity.runOptions = "--bind /data,/home" process { errorStrategy = 'finish' - memory = '256GB' + memory = '32GB' withLabel: big_mem_mono_cpus { cpus = 1 }