profiles { docker { docker.temp = 'auto' docker.enabled = true process { withname: dedup_sam { container = "samblaster:0.1.24" } } } psmn { process{ withname: dedup_sam { beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules" module = "samblaster/0.1.24" executor = "sge" cpus = 16 memory = "30GB" time = "24h" queue = 'E5-2670deb128A,E5-2670deb128B,E5-2670deb128C,E5-2670deb128D,E5-2670deb128E,E5-2670deb128F' penv = 'openmp16' } } } }