diff --git a/src/nf_modules/BEDtools/fasta_from_bed.config b/src/nf_modules/BEDtools/fasta_from_bed.config index 47a8bd94a9bcb8d975179fb8292dc69006a10446..5311e9f5e5d568c655a4ac17f167ea2799c1a704 100644 --- a/src/nf_modules/BEDtools/fasta_from_bed.config +++ b/src/nf_modules/BEDtools/fasta_from_bed.config @@ -13,7 +13,7 @@ profiles { singularity.enabled = true process { withName: trimming { - container = "file:///bin/bedtools:2.25.0.sif" + container = "file://bin/bedtools:2.25.0.sif" cpus = 1 } } diff --git a/src/singularity_modules/BEDtools/2.25.0/build.sh b/src/singularity_modules/BEDtools/2.25.0/build.sh index a7c8b82241798efc8bc122948932f0ad56b3730f..668a40c6a89620ba8bcd6e89b367b637d7309d2d 100755 --- a/src/singularity_modules/BEDtools/2.25.0/build.sh +++ b/src/singularity_modules/BEDtools/2.25.0/build.sh @@ -1,2 +1,2 @@ #/bin/sh -sudo singularity build --force /bin/bedtools:2.25.0.sif src/singularity_modules/BEDtools/2.25.0/BEDtools.def +sudo singularity build --force bin/bedtools:2.25.0.sif src/singularity_modules/BEDtools/2.25.0/BEDtools.def