From eb29dd1ff021832c5820e0e21f819adced19aab0 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent@modolo.fr>
Date: Fri, 6 Dec 2019 15:46:53 +0100
Subject: [PATCH] docker_modules: add gatk3.8.0

---
 src/.docker_modules/gatk/3.8.0/Dockerfile     | 4 ++++
 src/.docker_modules/gatk/3.8.0/docker_init.sh | 4 ++++
 2 files changed, 8 insertions(+)
 create mode 100644 src/.docker_modules/gatk/3.8.0/Dockerfile
 create mode 100755 src/.docker_modules/gatk/3.8.0/docker_init.sh

diff --git a/src/.docker_modules/gatk/3.8.0/Dockerfile b/src/.docker_modules/gatk/3.8.0/Dockerfile
new file mode 100644
index 00000000..82889b13
--- /dev/null
+++ b/src/.docker_modules/gatk/3.8.0/Dockerfile
@@ -0,0 +1,4 @@
+FROM quay.io/biocontainers/gatk:3.8--py27_1
+MAINTAINER Laurent Modolo
+
+ENV GATK_VERSION=3.8.0
diff --git a/src/.docker_modules/gatk/3.8.0/docker_init.sh b/src/.docker_modules/gatk/3.8.0/docker_init.sh
new file mode 100755
index 00000000..1188be23
--- /dev/null
+++ b/src/.docker_modules/gatk/3.8.0/docker_init.sh
@@ -0,0 +1,4 @@
+#!/bin/sh
+docker pull lbmc/gatk:3.8.0
+docker build src/.docker_modules/gatk/3.8.0 -t 'lbmc/gatk:3.8.0'
+docker push lbmc/gatk:3.8.0
-- 
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