From e9a183e33d4c961b90e9e4b6a62c0201b0c848ed Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 18 Jun 2018 17:11:09 +0200
Subject: [PATCH] Kallisto/0.44.0: add Dockerfile
---
src/docker_modules/Kallisto/0.44.0/Dockerfile | 15 +++++++++++++++
1 file changed, 15 insertions(+)
create mode 100644 src/docker_modules/Kallisto/0.44.0/Dockerfile
diff --git a/src/docker_modules/Kallisto/0.44.0/Dockerfile b/src/docker_modules/Kallisto/0.44.0/Dockerfile
new file mode 100644
index 00000000..9c4dd013
--- /dev/null
+++ b/src/docker_modules/Kallisto/0.44.0/Dockerfile
@@ -0,0 +1,15 @@
+FROM ubuntu:18.04
+MAINTAINER Laurent Modolo
+
+ENV KALLISTO_VERSION=0.44.0
+ENV PACKAGES curl=7.58.0* \
+ ca-certificates=20180409
+
+RUN apt-get update && \
+ apt-get install -y --no-install-recommends ${PACKAGES} && \
+ apt-get clean
+
+RUN curl -k -L https://github.com/pachterlab/kallisto/releases/download/v${KALLISTO_VERSION}/kallisto_linux-v${KALLISTO_VERSION}.tar.gz -o kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \
+tar xzf kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \
+cp kallisto_linux-v${KALLISTO_VERSION}/kallisto /usr/bin && \
+rm -Rf kallisto_linux-v${KALLISTO_VERSION}*
--
GitLab