From e3de37bcd7a2d1798bb5c98ca45bbe430982a6c8 Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent.modolo@ens-lyon.fr> Date: Thu, 15 Apr 2021 11:19:08 +0200 Subject: [PATCH] bwa: change index and fastq order for mapping --- src/nf_modules/bwa/main.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/nf_modules/bwa/main.nf b/src/nf_modules/bwa/main.nf index 5ae36893..a1c8fa0d 100644 --- a/src/nf_modules/bwa/main.nf +++ b/src/nf_modules/bwa/main.nf @@ -38,8 +38,8 @@ process mapping_fastq { } input: - tuple val(file_id), path(reads) tuple val(index_id), path(index) + tuple val(file_id), path(reads) output: tuple val(file_id), path("*.bam"), emit: bam -- GitLab