diff --git a/src/nf_modules/macs2/main.nf b/src/nf_modules/macs2/main.nf index d5306e5b54558269c3bbc7fa5038fd4ba7e9d958..2d437c3e6ee4b1e9e6a219f1301bef699d4fe036 100644 --- a/src/nf_modules/macs2/main.nf +++ b/src/nf_modules/macs2/main.nf @@ -2,7 +2,6 @@ version = "2.1.2" container_url = "lbmc/macs2:${version}" params.macs_gsize=3e9 -params.macs_mfold=[5, 50] process peak_calling { container = "${container_url}" @@ -24,7 +23,6 @@ macs2 callpeak \ --call-summits \ --control ${bam_control} \ --keep-dup all \ - --mfold params.macs_mfold[0] params.macs_mfold[1] --name ${bam_ip.simpleName} \ --gsize ${params.macs_gsize} 2> \ ${bam_ip.simpleName}_macs2_report.txt @@ -60,7 +58,6 @@ macs2 callpeak \ --call-summits \ --control ${bg_control.simpleName}.bed \ --keep-dup all \ - --mfold params.macs_mfold[0] params.macs_mfold[1] --name ${bg_ip.simpleName} \ --gsize ${params.macs_gsize} 2> \ ${bg_ip.simpleName}_macs2_report.txt