diff --git a/src/.docker_modules/bamutils/1.0.14/Dockerfile b/src/.docker_modules/bamutils/1.0.14/Dockerfile new file mode 100644 index 0000000000000000000000000000000000000000..9a116c6d442d99a997f1d9f5ada95a46e5366ab1 --- /dev/null +++ b/src/.docker_modules/bamutils/1.0.14/Dockerfile @@ -0,0 +1,22 @@ +FROM ubuntu:18.04 +MAINTAINER Laurent Modolo + +ENV BAMUTILS_VERSION=1.0.14 +ENV PACKAGES git \ + build-essential \ + g++ \ + libssl-dev \ + zlib1g-dev + +RUN apt-get update && apt-get -y install ${PACKAGES} + +RUN git clone https://github.com/statgen/libStatGen && \ +cd libStatGen && \ +git checkout fae4fca874b3b78bf9b61c0 && \ +make && \ +cd ../ && \ +git clone https://github.com/statgen/bamUtil && \ +cd bamUtil && \ +git checkout v${BAMUTILS_VERSION} && \ +make && \ +make install diff --git a/src/.docker_modules/bamutils/1.0.14/docker_init.sh b/src/.docker_modules/bamutils/1.0.14/docker_init.sh new file mode 100755 index 0000000000000000000000000000000000000000..2d89e9ccd542b1a848d74231068cff94bfe92239 --- /dev/null +++ b/src/.docker_modules/bamutils/1.0.14/docker_init.sh @@ -0,0 +1,4 @@ +#!/bin/sh +docker pull lbmc/bamutils:1.0.14 +docker build src/.docker_modules/bamutils/1.0.14 -t 'lbmc/bamutils:1.0.14' +docker push lbmc/bamutils:1.0.14