From c8aeb67c872eb01bf49cbf14150d9b9d7b7cbae1 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Wed, 2 Jun 2021 11:04:03 +0200
Subject: [PATCH] example_variant_calling.nf: fix fasta var
---
src/example_variant_calling.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/example_variant_calling.nf b/src/example_variant_calling.nf
index 0c702330..01fb2dfc 100644
--- a/src/example_variant_calling.nf
+++ b/src/example_variant_calling.nf
@@ -24,6 +24,6 @@ channel
.set { fasta_files }
workflow {
- mapping(fasta, fastq_files)
- germline_cohort_data_variant_calling(mapping.out.bam, fasta)
+ mapping(fasta_files, fastq_files)
+ germline_cohort_data_variant_calling(mapping.out.bam, fasta_files)
}
--
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