Commit c6497eb4 authored by Xavier Grand's avatar Xavier Grand
Browse files

fonctionnel jusqu au peak calling

parent c59b12b6
......@@ -33,7 +33,7 @@ log.info "genome sizes : ${params.chrom_sizes}"
/*
****************************************************************
Channel definitions
Channel definitions
****************************************************************
*/
......@@ -42,7 +42,8 @@ if (params.paired_end) {
error "Not Implemented"
/*
Channel
.fromFilePairs( params.fastq, size: 2 ) //def une error
.fromFilePairs( params.input.collect { k, v -> "${params.fastq_folder}/${v{1,2}.fastq}", size: 2 )
.ifEmpty { error "No fastq file defined" }
.set { fastq_files }
*/
} else {
......
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