From b9d4fdda93bcaca737b9929d2b916a3907785a29 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Wed, 3 Feb 2021 12:12:03 +0100
Subject: [PATCH] samtools: main.nf clarify bam_index output1
---
src/nf_modules/samtools/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/nf_modules/samtools/main.nf b/src/nf_modules/samtools/main.nf
index a0f44cf1..265f6c10 100644
--- a/src/nf_modules/samtools/main.nf
+++ b/src/nf_modules/samtools/main.nf
@@ -63,7 +63,7 @@ process index_bam {
output:
tuple val(file_id), path(bam), emit: bam
- tuple val(file_id), path("*.bam*"), emit: bam_idx
+ tuple val(file_id), path("*.bam.bai"), emit: bam_idx
script:
"""
--
GitLab