From ad62a2408d603dc21791b417365be4579a1a3939 Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent@modolo.fr> Date: Wed, 20 Jan 2021 17:38:53 +0100 Subject: [PATCH] solution_RNASeq.nf: add command to launch pipeline --- src/solution_RNASeq.nf | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/src/solution_RNASeq.nf b/src/solution_RNASeq.nf index 73940d65..914f07f7 100644 --- a/src/solution_RNASeq.nf +++ b/src/solution_RNASeq.nf @@ -1,3 +1,7 @@ +/* +./nextflow src/solution_RNASeq.nf -c src/solution_RNASeq.config --fastq "data/tiny_dataset/fastq/tiny2_R{1,2}.fastq.gz" --fasta "data/tiny_dataset/fasta/tiny_v2_10.fasta" --bed "data/tiny_dataset/annot/tiny.bed" -profile docker +*/ + log.info "fastq files : ${params.fastq}" log.info "fasta file : ${params.fasta}" log.info "bed file : ${params.bed}" -- GitLab