From 86a3e164358d390d04e8d12b70798eefe8be40b1 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent@modolo.fr>
Date: Tue, 23 Oct 2018 16:16:06 +0200
Subject: [PATCH] MUSIC: update psmn config
---
.../MUSIC/peak_calling_single.config | 24 ++++++++++++++++---
1 file changed, 21 insertions(+), 3 deletions(-)
diff --git a/src/nf_modules/MUSIC/peak_calling_single.config b/src/nf_modules/MUSIC/peak_calling_single.config
index 1b53d90d..f581bd0c 100644
--- a/src/nf_modules/MUSIC/peak_calling_single.config
+++ b/src/nf_modules/MUSIC/peak_calling_single.config
@@ -17,13 +17,31 @@ profiles {
psmn {
process{
withname: compute_mappability {
- beforeScript = "module purge; module load MUSIC/6613c53"
+ beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
+ module = "MUSIC/6613c53"
+ executor = "psmn"
+ cpus = 1
+ memory = "20GB"
+ time = "12h"
+ queue = 'monointeldeb128'
}
withname: music_preprocessing {
- beforeScript = "module purge; module load MUSIC/6613c53"
+ beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
+ module = "MUSIC/6613c53"
+ executor = "psmn"
+ cpus = 1
+ memory = "20GB"
+ time = "12h"
+ queue = 'monointeldeb128'
}
withname: music_computation {
- beforeScript = "module purge; module load MUSIC/6613c53"
+ beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
+ module = "MUSIC/6613c53"
+ executor = "psmn"
+ cpus = 1
+ memory = "20GB"
+ time = "12h"
+ queue = 'monointeldeb128'
}
}
}
--
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