From 81ab11165fb986ddf85d840026b9f5920ebc4a67 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Thu, 4 Feb 2021 10:52:17 +0100
Subject: [PATCH] docker: add ucsc:407
---
src/.docker_modules/ucsc/407/Dockerfile | 27 +++++++++++++++++++++
src/.docker_modules/ucsc/407/docker_init.sh | 4 +++
2 files changed, 31 insertions(+)
create mode 100644 src/.docker_modules/ucsc/407/Dockerfile
create mode 100755 src/.docker_modules/ucsc/407/docker_init.sh
diff --git a/src/.docker_modules/ucsc/407/Dockerfile b/src/.docker_modules/ucsc/407/Dockerfile
new file mode 100644
index 00000000..1499bdb1
--- /dev/null
+++ b/src/.docker_modules/ucsc/407/Dockerfile
@@ -0,0 +1,27 @@
+FROM debian:jessie
+MAINTAINER Laurent Modolo
+
+ENV PACKAGES apt-utils \
+ curl \
+ build-essential \
+ libssl-dev \
+ libpng-dev \
+ uuid-dev \
+ libmysqlclient-dev \
+ procps \
+ rsync
+
+
+RUN apt-get update && \
+ apt-get install -y ${PACKAGES}
+
+ENV UCSC_VERSION=407
+
+RUN curl -k -L http://hgdownload.soe.ucsc.edu/admin/exe/userApps.v${UCSC_VERSION}.src.tgz -o userApps.v${UCSC_VERSION}.src.tgz &&\
+tar xvf userApps.v${UCSC_VERSION}.src.tgz &&\
+cd userApps/ && \
+make &&\
+cd .. &&\
+mv userApps/bin/* /usr/bin/ &&\
+rm -R userApps.v${UCSC_VERSION}.src.tgz &&\
+rm -R userApps
diff --git a/src/.docker_modules/ucsc/407/docker_init.sh b/src/.docker_modules/ucsc/407/docker_init.sh
new file mode 100755
index 00000000..1f092a8f
--- /dev/null
+++ b/src/.docker_modules/ucsc/407/docker_init.sh
@@ -0,0 +1,4 @@
+#!/bin/sh
+docker pull lbmc/ucsc:407
+docker build src/.docker_modules/ucsc/407/ -t 'lbmc/ucsc:407'
+docker push lbmc/ucsc:407
--
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