diff --git a/src/nf_modules/bowtie/mapping_paired.nf b/src/nf_modules/bowtie/mapping_paired.nf index 46c2cd843317c3cb83feffb54c3ee8c883951b11..90b47ba41994003c42653cc40f1736513100d76f 100644 --- a/src/nf_modules/bowtie/mapping_paired.nf +++ b/src/nf_modules/bowtie/mapping_paired.nf @@ -47,7 +47,7 @@ samtools view -Sb - > ${pair_id}.bam if grep -q "Error" ${pair_id}_bowtie_report_tmp.txt; then exit 1 fi -tail -n 15 ${pair_id}_bowtie_report_tmp.txt > ${pair_id}_bowtie_report.txt +tail -n 19 ${pair_id}_bowtie_report_tmp.txt > ${pair_id}_bowtie_report.txt """ } diff --git a/src/nf_modules/bowtie/mapping_single.nf b/src/nf_modules/bowtie/mapping_single.nf index a86e424c1dc5b9aba049dfc164786ef0bfab820e..268bdfa85071a766c027aa518e38bcfc4778b303 100644 --- a/src/nf_modules/bowtie/mapping_single.nf +++ b/src/nf_modules/bowtie/mapping_single.nf @@ -45,6 +45,6 @@ samtools view -Sb - > ${file_id}.bam if grep -q "Error" ${file_id}_bowtie_report_tmp.txt; then exit 1 fi -tail -n 15 ${file_id}_bowtie_report_tmp.txt > ${file_id}_bowtie_report.txt +tail -n 19 ${file_id}_bowtie_report_tmp.txt > ${file_id}_bowtie_report.txt """ } diff --git a/src/nf_modules/bowtie2/mapping_paired.nf b/src/nf_modules/bowtie2/mapping_paired.nf index bd03c7c386121880233a8b7a57cedb3fea0655e1..225508d88449f0141775902092b1fb4e4e57ffc2 100644 --- a/src/nf_modules/bowtie2/mapping_paired.nf +++ b/src/nf_modules/bowtie2/mapping_paired.nf @@ -41,7 +41,7 @@ samtools view -Sb - > ${pair_id}.bam if grep -q "Error" ${pair_id}_bowtie2_report_tmp.txt; then exit 1 fi -tail -n 15 ${pair_id}_bowtie2_report_tmp.txt > ${pair_id}_bowtie2_report.txt +tail -n 19 ${pair_id}_bowtie2_report_tmp.txt > ${pair_id}_bowtie2_report.txt """ } diff --git a/src/nf_modules/bowtie2/mapping_single.nf b/src/nf_modules/bowtie2/mapping_single.nf index a264cb72feb20381d67f91aa17b2c390532d3fe4..b5bfff2b11cdb837f216b0b1a245587c486c84d2 100644 --- a/src/nf_modules/bowtie2/mapping_single.nf +++ b/src/nf_modules/bowtie2/mapping_single.nf @@ -41,6 +41,6 @@ samtools view -Sb - > ${file_id}.bam if grep -q "Error" ${file_id}_bowtie2_report_tmp.txt; then exit 1 fi -tail -n 15 ${file_id}_bowtie2_report_tmp.txt > ${file_id}_bowtie2_report.txt +tail -n 19 ${file_id}_bowtie2_report_tmp.txt > ${file_id}_bowtie2_report.txt """ }