From 72580e6b9cbfee0ef1b5c7f9bc7e6c0e52b813dd Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent.modolo@ens-lyon.fr> Date: Mon, 19 Jul 2021 10:07:06 +0200 Subject: [PATCH] kb: create a backup of t2g.txt as kb rewrite it --- src/nf_modules/kb/main.nf | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/src/nf_modules/kb/main.nf b/src/nf_modules/kb/main.nf index 2df29caa..9e4cfec2 100644 --- a/src/nf_modules/kb/main.nf +++ b/src/nf_modules/kb/main.nf @@ -37,7 +37,8 @@ process tr2g { script: """ t2g.py --gtf ${gtf} - uniq t2g_dup.txt > t2g.txt + sort -u t2g_dup.txt > t2g.txt + rm t2g_dup.txt """ } -- GitLab