From 7101af2ceefbd1fa8f702b99774cd7407a8f5530 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Thu, 29 Apr 2021 09:47:34 +0200
Subject: [PATCH] emase-zero: fix channel cardiality
---
src/nf_modules/emase-zero/main.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/nf_modules/emase-zero/main.nf b/src/nf_modules/emase-zero/main.nf
index 1b3cf3e1..0365053a 100644
--- a/src/nf_modules/emase-zero/main.nf
+++ b/src/nf_modules/emase-zero/main.nf
@@ -14,8 +14,8 @@ workflow count {
main:
tr2g(gtf, channel.of(["NO T2G", ""]))
- bam2ec(bam, gtf)
- emase(bam2ec.out.bin, bam2ec.out.tsv, tr2g.out.t2g)
+ bam2ec(bam, gtf.collect())
+ emase(bam2ec.out.bin, bam2ec.out.tsv.collect(), tr2g.out.t2g.collect())
emit:
count: emase.count
--
GitLab