diff --git a/src/nf_modules/multiqc/tests.sh b/src/nf_modules/multiqc/tests.sh index 0ba607642695fc8a0e30c67f3658cef0da020378..ff23852be9e17167a860752f869a5cde154e4d87 100755 --- a/src/nf_modules/multiqc/tests.sh +++ b/src/nf_modules/multiqc/tests.sh @@ -13,13 +13,13 @@ if [ -x "$(command -v singularity)" ]; then ./nextflow src/nf_modules/multiqc/multiqc_paired.nf \ -c src/nf_modules/multiqc/multiqc_paired.config \ - -profile docker \ + -profile singularity \ --fastq "data/tiny_dataset/fastq/tiny_R{1,2}.fastq" \ -resume ./nextflow src/nf_modules/multiqc/multiqc_single.nf \ -c src/nf_modules/multiqc/multiqc_single.config \ - -profile docker \ + -profile singularity \ --fastq "data/tiny_dataset/fastq/tiny_S.fastq" \ -resume fi