diff --git a/src/nf_modules/bioawk/main.nf b/src/nf_modules/bioawk/main.nf index 2322a0394baab55ee83ff644975fb2eb89807f05..eaa5a4a2e50a1e9244f99ae6cc9fb10401bfb5a9 100644 --- a/src/nf_modules/bioawk/main.nf +++ b/src/nf_modules/bioawk/main.nf @@ -19,6 +19,6 @@ process fasta_to_transcripts_lengths { script: """ -bioawk -c fastx '{print \$name length(\$seq)}' ${fasta} > ${fasta.simpleName}_transcripts_lengths.tsv +bioawk -c fastx '{print(\$name" "length(\$seq))}' ${fasta} > ${fasta.simpleName}_transcripts_lengths.tsv """ } \ No newline at end of file