diff --git a/src/nf_modules/bowtie2/indexing.config b/src/nf_modules/bowtie2/indexing.config
index 6a9d607102705bf3fd72b8ec55d70a62779ce762..80de2148b072dbf77ba3974b2acc7c6fc08dba56 100644
--- a/src/nf_modules/bowtie2/indexing.config
+++ b/src/nf_modules/bowtie2/indexing.config
@@ -33,4 +33,19 @@ profiles {
       }
     }
   }
+  ccin2p3 {
+    process{
+      withName: index_fasta {
+        beforeScript = "PATH=/sps/lbmc/common/nextflow/src/singularity_modules/bowtie2/2.3.4.1/:/usr/bin:$PATH"
+        scratch = true
+        stageInMode = "copy"
+        stageOutMode = "rsync"
+        executor = "sge"
+        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        cpus = 1
+        memory = "10GB"
+        time = "24h"
+      }
+    }
+  }
 }
diff --git a/src/nf_modules/bowtie2/mapping_paired.config b/src/nf_modules/bowtie2/mapping_paired.config
index 63ba18af26d8973f09f63693e3a3eb16691eac0e..44adb9a536af636e5f70f6d664fc4d49ed3f4c03 100644
--- a/src/nf_modules/bowtie2/mapping_paired.config
+++ b/src/nf_modules/bowtie2/mapping_paired.config
@@ -33,4 +33,19 @@ profiles {
       }
     }
   }
+  ccin2p3 {
+    process{
+      withName: mapping_fastq {
+        beforeScript = "PATH=/sps/lbmc/common/nextflow/src/singularity_modules/bowtie2/2.3.4.1/:/usr/bin:$PATH"
+        scratch = true
+        stageInMode = "copy"
+        stageOutMode = "rsync"
+        executor = "sge"
+        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        cpus = 1
+        memory = "10GB"
+        time = "24h"
+      }
+    }
+  }
 }
diff --git a/src/nf_modules/bowtie2/mapping_single.config b/src/nf_modules/bowtie2/mapping_single.config
index 63ba18af26d8973f09f63693e3a3eb16691eac0e..44adb9a536af636e5f70f6d664fc4d49ed3f4c03 100644
--- a/src/nf_modules/bowtie2/mapping_single.config
+++ b/src/nf_modules/bowtie2/mapping_single.config
@@ -33,4 +33,19 @@ profiles {
       }
     }
   }
+  ccin2p3 {
+    process{
+      withName: mapping_fastq {
+        beforeScript = "PATH=/sps/lbmc/common/nextflow/src/singularity_modules/bowtie2/2.3.4.1/:/usr/bin:$PATH"
+        scratch = true
+        stageInMode = "copy"
+        stageOutMode = "rsync"
+        executor = "sge"
+        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        cpus = 1
+        memory = "10GB"
+        time = "24h"
+      }
+    }
+  }
 }