diff --git a/src/nf_modules/multiqc/multiqc_paired.config b/src/nf_modules/multiqc/multiqc_paired.config index c8fe4a1d9c3cc85287d80a6e578b780178ac6dd6..c7651b6fc15e30eb7cefa1a9ce560db0e4b20878 100644 --- a/src/nf_modules/multiqc/multiqc_paired.config +++ b/src/nf_modules/multiqc/multiqc_paired.config @@ -34,6 +34,17 @@ profiles { singularity.runOptions = "--bind /Xnfs,/scratch" process{ withName: fastqc_fastq { + container = "lbmc/fastqc:0.11.5" + executor = "sge" + clusterOptions = "-cwd -V" + cpus = 1 + memory = "5GB" + time = "6h" + queueSize = 1.70 + pollInterval = "60sec" + queue = "monointeldeb128" + } + withName: multiqc { container = "lbmc/multiqc:1.7" executor = "sge" clusterOptions = "-cwd -V"