diff --git a/src/nf_modules/deepTools/bam_to_bigwig.config b/src/nf_modules/deepTools/bam_to_bigwig.config new file mode 100644 index 0000000000000000000000000000000000000000..6ecf0ac2681286bad98b0677f29f44c399b0d1cd --- /dev/null +++ b/src/nf_modules/deepTools/bam_to_bigwig.config @@ -0,0 +1,24 @@ +profiles { + docker { + docker.temp = 'auto' + docker.enabled = true + process { + withName: bam_to_bigwig { + container = "deeptools:3.0.2" + } + } + } + psmn { + process{ + withName: bam_to_bigwig { + beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules" + module = "deepTools/3.0.2" + executor = "sge" + clusterOptions = "-m e -cwd -V" + memory = "20GB" + time = "12h" + queue = 'monointeldeb128' + } + } + } +}