diff --git a/src/nf_modules/UrQt/urqt.nf b/src/nf_modules/UrQt/urqt.nf index ece556aaa238f17cb3db8a42f52791ad0638951c..85247d9863e369ee17c157aa43fced608e3cad68 100644 --- a/src/nf_modules/UrQt/urqt.nf +++ b/src/nf_modules/UrQt/urqt.nf @@ -27,7 +27,7 @@ process trimming { set pair_id, file(reads) from fastq_files output: - file "*_trim_R{1,2}.fastq.gz" into fastq_files_cut + file "*_trim_R{1,2}.fastq.gz" into fastq_files_trim script: """ diff --git a/src/nf_modules/cutadapt/cutadapt.nf b/src/nf_modules/cutadapt/cutadapt.nf index 094f30b9483c241b308bc245c5e51d3bbf896a1a..e2a0681a6e81c80a36fc51e5306f3e1828e87bee 100644 --- a/src/nf_modules/cutadapt/cutadapt.nf +++ b/src/nf_modules/cutadapt/cutadapt.nf @@ -91,7 +91,7 @@ process trimming { set pair_id, file(reads) from fastq_files output: - file "*_trim_R{1,2}.fastq.gz" into fastq_files_cut + file "*_trim_R{1,2}.fastq.gz" into fastq_files_trim script: """ @@ -122,7 +122,7 @@ process trimming { file reads from fastq_files output: - file "*_trim.fastq.gz" into fastq_files_cut + file "*_trim.fastq.gz" into fastq_files_trim script: """