diff --git a/src/.docker_modules/ucsc/400/Dockerfile b/src/.docker_modules/ucsc/400/Dockerfile new file mode 100644 index 0000000000000000000000000000000000000000..6409f862f0c1b51d853597cd4404bb55f03137c2 --- /dev/null +++ b/src/.docker_modules/ucsc/400/Dockerfile @@ -0,0 +1,27 @@ +FROM debian:jessie +MAINTAINER Laurent Modolo + +ENV PACKAGES apt-utils \ + curl \ + build-essential \ + libssl-dev \ + libpng-dev \ + uuid-dev \ + libmysqlclient-dev \ + procps \ + rsync + + +RUN apt-get update && \ + apt-get install -y ${PACKAGES} + +ENV UCSC_VERSION=400 + +RUN curl -k -L http://hgdownload.soe.ucsc.edu/admin/exe/userApps.v${UCSC_VERSION}.src.tgz -o userApps.v${UCSC_VERSION}.src.tgz &&\ +tar xvf userApps.v${UCSC_VERSION}.src.tgz &&\ +cd userApps/ && \ +make &&\ +cd .. &&\ +mv userApps/bin/* /usr/bin/ &&\ +rm -R userApps.v${UCSC_VERSION}.src.tgz &&\ +rm -R userApps diff --git a/src/.docker_modules/ucsc/400/docker_init.sh b/src/.docker_modules/ucsc/400/docker_init.sh new file mode 100755 index 0000000000000000000000000000000000000000..83c2161652164d7ccecaf82b4ca25babde445599 --- /dev/null +++ b/src/.docker_modules/ucsc/400/docker_init.sh @@ -0,0 +1,4 @@ +#!/bin/sh +docker pull lbmc/ucsc:400 +docker build src/.docker_modules/ucsc/400/ -t 'lbmc/ucsc:400' +docker push lbmc/ucsc:400