diff --git a/src/.docker_modules/gffread/0.11.8/Dockerfile b/src/.docker_modules/gffread/0.11.8/Dockerfile new file mode 100644 index 0000000000000000000000000000000000000000..f56e906c077111485b6c614d927aae3a7089b2c7 --- /dev/null +++ b/src/.docker_modules/gffread/0.11.8/Dockerfile @@ -0,0 +1,14 @@ +FROM alpine:3.12 +MAINTAINER Laurent Modolo + +ENV GFFREAD_VERSION=0.11.8 +ENV PACKAGES make \ + g++ + +RUN apk update && \ + apk add ${PACKAGES} && \ +wget http://ccb.jhu.edu/software/stringtie/dl/gffread-${GFFREAD_VERSION}.tar.gz && \ +tar -xvf gffread-${GFFREAD_VERSION}.tar.gz && \ +cd gffread-${GFFREAD_VERSION}/ && \ +make && \ +cp gffread /usr/bin/ diff --git a/src/.docker_modules/gffread/0.11.8/docker_init.sh b/src/.docker_modules/gffread/0.11.8/docker_init.sh new file mode 100755 index 0000000000000000000000000000000000000000..44c18612cbc9b8d5c093d980848bfc03d1b2f1e6 --- /dev/null +++ b/src/.docker_modules/gffread/0.11.8/docker_init.sh @@ -0,0 +1,4 @@ +#!/bin/sh +docker pull lbmc/gffread:0.11.8 +docker build src/.docker_modules/gffread/0.11.8 -t 'lbmc/gffread:0.11.8' +docker push lbmc/gffread:0.11.8