diff --git a/src/nf_modules/picard/main.nf b/src/nf_modules/picard/main.nf index d788992704fa1c5dd7f2124719d1e5b8638f19ab..aa24096cef2ee44322e8648532b2a7ebe092411a 100644 --- a/src/nf_modules/picard/main.nf +++ b/src/nf_modules/picard/main.nf @@ -33,13 +33,13 @@ process index_fasta { input: tuple val(file_id), path(fasta) output: - tuple val(file_id), path("*.dict"), emit: index + tuple val(file_id), path("*.dict"), emit: index script: """ PicardCommandLine CreateSequenceDictionary \ REFERENCE=${fasta} \ -OUTPUT=${fasta}.dict +OUTPUT=${fasta.baseName}.dict """ }