From 3a68155867f930cc6ced4717ccfcaca40e847479 Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent@modolo.fr> Date: Fri, 22 Nov 2019 16:33:17 +0100 Subject: [PATCH] psmn: test of new symlink structure for conda env --- src/.conda_envs/.conda_envs_dir_test | 1 + src/.conda_envs/Python_2.7.13 | 1 + src/.conda_envs/Python_3.6.1 | 1 + src/.conda_envs/R_3.3.1 | 1 + src/.conda_envs/R_3.4.3 | 1 + src/.conda_envs/axtchain_377 | 1 + src/.conda_envs/bcftools_1.7 | 1 + src/.conda_envs/bedtools_2.25.0 | 1 + src/.conda_envs/bioawk_1.0 | 1 + src/.conda_envs/biopython_1.74 | 1 + src/.conda_envs/bowtie2_2.3.2 | 1 + src/.conda_envs/bowtie2_2.3.4.1 | 1 + src/.conda_envs/canu_1.7 | 1 + src/.conda_envs/cdhit_4.6.8 | 1 + src/.conda_envs/cutadapt_1.14 | 1 + src/.conda_envs/cutadapt_2.4 | 1 + src/.conda_envs/deeptools_3.0.2 | 1 + src/{.conda_envs => .conda_envs/envs} | 0 src/.conda_envs/fastp_0.19.7 | 1 + src/.conda_envs/fastqc_0.11.5 | 1 + src/.conda_envs/flexi-splitter_1.0.0 | 1 + src/.conda_envs/gatk_3.8 | 1 + src/.conda_envs/hisat2_2.0.0 | 1 + src/.conda_envs/hisat2_2.1.0 | 1 + src/.conda_envs/htseq_0.11.2 | 1 + src/.conda_envs/htseq_0.9.1 | 1 + src/.conda_envs/kallisto_0.43.1 | 1 + src/.conda_envs/kallisto_0.44.0 | 1 + src/.conda_envs/liftover_357 | 1 + src/.conda_envs/macs2_2.1.2 | 1 + src/.conda_envs/multiqc_0.9 | 1 + src/.conda_envs/multiqc_1.0 | 1 + src/.conda_envs/multiqc_1.7 | 1 + src/.conda_envs/music_1.0.0 | 1 + src/.conda_envs/nextflow_0.25.1 | 1 + src/.conda_envs/nextflow_0.28.2 | 1 + src/.conda_envs/nextflow_0.32.0 | 1 + src/.conda_envs/nextflow_19.01.0 | 1 + src/.conda_envs/picard_2.18.11 | 1 + src/.conda_envs/pigz_2.3.4 | 1 + src/.conda_envs/prinseq_0.20.4 | 1 + src/.conda_envs/ribotish_0.2.4 | 1 + src/.conda_envs/rsem_1.3.0 | 1 + src/.conda_envs/rsem_1.3.1 | 1 + src/.conda_envs/salmon_0.8.2 | 1 + src/.conda_envs/samblaster_0.1.24 | 1 + src/.conda_envs/samtools_1.5 | 1 + src/.conda_envs/samtools_1.7 | 1 + src/.conda_envs/seaborn_0.9.0 | 1 + src/.conda_envs/splicing_lore_env | 1 + src/.conda_envs/sra-tools_2.8.2 | 1 + src/.conda_envs/star_2.5.3a | 1 + src/.conda_envs/star_2.7.0e | 1 + src/.conda_envs/star_2.7.3a | 1 + src/.conda_envs/subread_1.6.4 | 1 + src/.conda_envs/tophat_2.1.1 | 1 + src/.conda_envs/trimmomatic_0.36 | 1 + src/.conda_envs/trimmomatic_0.39 | 1 + src/.conda_envs/ucsc_375 | 1 + src/.conda_envs/umitools_0.3.4 | 1 + src/.conda_envs/urqt_d62c1f8 | 1 + 61 files changed, 60 insertions(+) create mode 120000 src/.conda_envs/.conda_envs_dir_test create mode 120000 src/.conda_envs/Python_2.7.13 create mode 120000 src/.conda_envs/Python_3.6.1 create mode 120000 src/.conda_envs/R_3.3.1 create mode 120000 src/.conda_envs/R_3.4.3 create mode 120000 src/.conda_envs/axtchain_377 create mode 120000 src/.conda_envs/bcftools_1.7 create mode 120000 src/.conda_envs/bedtools_2.25.0 create mode 120000 src/.conda_envs/bioawk_1.0 create mode 120000 src/.conda_envs/biopython_1.74 create mode 120000 src/.conda_envs/bowtie2_2.3.2 create mode 120000 src/.conda_envs/bowtie2_2.3.4.1 create mode 120000 src/.conda_envs/canu_1.7 create mode 120000 src/.conda_envs/cdhit_4.6.8 create mode 120000 src/.conda_envs/cutadapt_1.14 create mode 120000 src/.conda_envs/cutadapt_2.4 create mode 120000 src/.conda_envs/deeptools_3.0.2 rename src/{.conda_envs => .conda_envs/envs} (100%) create mode 120000 src/.conda_envs/fastp_0.19.7 create mode 120000 src/.conda_envs/fastqc_0.11.5 create mode 120000 src/.conda_envs/flexi-splitter_1.0.0 create mode 120000 src/.conda_envs/gatk_3.8 create mode 120000 src/.conda_envs/hisat2_2.0.0 create mode 120000 src/.conda_envs/hisat2_2.1.0 create mode 120000 src/.conda_envs/htseq_0.11.2 create mode 120000 src/.conda_envs/htseq_0.9.1 create mode 120000 src/.conda_envs/kallisto_0.43.1 create mode 120000 src/.conda_envs/kallisto_0.44.0 create mode 120000 src/.conda_envs/liftover_357 create mode 120000 src/.conda_envs/macs2_2.1.2 create mode 120000 src/.conda_envs/multiqc_0.9 create mode 120000 src/.conda_envs/multiqc_1.0 create mode 120000 src/.conda_envs/multiqc_1.7 create mode 120000 src/.conda_envs/music_1.0.0 create mode 120000 src/.conda_envs/nextflow_0.25.1 create mode 120000 src/.conda_envs/nextflow_0.28.2 create mode 120000 src/.conda_envs/nextflow_0.32.0 create mode 120000 src/.conda_envs/nextflow_19.01.0 create mode 120000 src/.conda_envs/picard_2.18.11 create mode 120000 src/.conda_envs/pigz_2.3.4 create mode 120000 src/.conda_envs/prinseq_0.20.4 create mode 120000 src/.conda_envs/ribotish_0.2.4 create mode 120000 src/.conda_envs/rsem_1.3.0 create mode 120000 src/.conda_envs/rsem_1.3.1 create mode 120000 src/.conda_envs/salmon_0.8.2 create mode 120000 src/.conda_envs/samblaster_0.1.24 create mode 120000 src/.conda_envs/samtools_1.5 create mode 120000 src/.conda_envs/samtools_1.7 create mode 120000 src/.conda_envs/seaborn_0.9.0 create mode 120000 src/.conda_envs/splicing_lore_env create mode 120000 src/.conda_envs/sra-tools_2.8.2 create mode 120000 src/.conda_envs/star_2.5.3a create mode 120000 src/.conda_envs/star_2.7.0e create mode 120000 src/.conda_envs/star_2.7.3a create mode 120000 src/.conda_envs/subread_1.6.4 create mode 120000 src/.conda_envs/tophat_2.1.1 create mode 120000 src/.conda_envs/trimmomatic_0.36 create mode 120000 src/.conda_envs/trimmomatic_0.39 create mode 120000 src/.conda_envs/ucsc_375 create mode 120000 src/.conda_envs/umitools_0.3.4 create mode 120000 src/.conda_envs/urqt_d62c1f8 diff --git a/src/.conda_envs/.conda_envs_dir_test b/src/.conda_envs/.conda_envs_dir_test new file mode 120000 index 00000000..79b89f16 --- /dev/null +++ b/src/.conda_envs/.conda_envs_dir_test @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/.conda_envs_dir_test \ No newline at end of file diff --git a/src/.conda_envs/Python_2.7.13 b/src/.conda_envs/Python_2.7.13 new file mode 120000 index 00000000..5c91793f --- /dev/null +++ b/src/.conda_envs/Python_2.7.13 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/Python_2.7.13 \ No newline at end of file diff --git a/src/.conda_envs/Python_3.6.1 b/src/.conda_envs/Python_3.6.1 new file mode 120000 index 00000000..7a6e74cf --- /dev/null +++ b/src/.conda_envs/Python_3.6.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/Python_3.6.1 \ No newline at end of file diff --git a/src/.conda_envs/R_3.3.1 b/src/.conda_envs/R_3.3.1 new file mode 120000 index 00000000..6544e090 --- /dev/null +++ b/src/.conda_envs/R_3.3.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/R_3.3.1 \ No newline at end of file diff --git a/src/.conda_envs/R_3.4.3 b/src/.conda_envs/R_3.4.3 new file mode 120000 index 00000000..2f455802 --- /dev/null +++ b/src/.conda_envs/R_3.4.3 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/R_3.4.3 \ No newline at end of file diff --git a/src/.conda_envs/axtchain_377 b/src/.conda_envs/axtchain_377 new file mode 120000 index 00000000..845b1a93 --- /dev/null +++ b/src/.conda_envs/axtchain_377 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/axtchain_377 \ No newline at end of file diff --git a/src/.conda_envs/bcftools_1.7 b/src/.conda_envs/bcftools_1.7 new file mode 120000 index 00000000..c77cd622 --- /dev/null +++ b/src/.conda_envs/bcftools_1.7 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/bcftools_1.7 \ No newline at end of file diff --git a/src/.conda_envs/bedtools_2.25.0 b/src/.conda_envs/bedtools_2.25.0 new file mode 120000 index 00000000..da8bc774 --- /dev/null +++ b/src/.conda_envs/bedtools_2.25.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/bedtools_2.25.0 \ No newline at end of file diff --git a/src/.conda_envs/bioawk_1.0 b/src/.conda_envs/bioawk_1.0 new file mode 120000 index 00000000..1907adb0 --- /dev/null +++ b/src/.conda_envs/bioawk_1.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/bioawk_1.0 \ No newline at end of file diff --git a/src/.conda_envs/biopython_1.74 b/src/.conda_envs/biopython_1.74 new file mode 120000 index 00000000..a32165ca --- /dev/null +++ b/src/.conda_envs/biopython_1.74 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/biopython_1.74 \ No newline at end of file diff --git a/src/.conda_envs/bowtie2_2.3.2 b/src/.conda_envs/bowtie2_2.3.2 new file mode 120000 index 00000000..6f58283d --- /dev/null +++ b/src/.conda_envs/bowtie2_2.3.2 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/bowtie2_2.3.2 \ No newline at end of file diff --git a/src/.conda_envs/bowtie2_2.3.4.1 b/src/.conda_envs/bowtie2_2.3.4.1 new file mode 120000 index 00000000..ee79b396 --- /dev/null +++ b/src/.conda_envs/bowtie2_2.3.4.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/bowtie2_2.3.4.1 \ No newline at end of file diff --git a/src/.conda_envs/canu_1.7 b/src/.conda_envs/canu_1.7 new file mode 120000 index 00000000..3b3b783c --- /dev/null +++ b/src/.conda_envs/canu_1.7 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/canu_1.7 \ No newline at end of file diff --git a/src/.conda_envs/cdhit_4.6.8 b/src/.conda_envs/cdhit_4.6.8 new file mode 120000 index 00000000..0250dfbb --- /dev/null +++ b/src/.conda_envs/cdhit_4.6.8 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/cdhit_4.6.8 \ No newline at end of file diff --git a/src/.conda_envs/cutadapt_1.14 b/src/.conda_envs/cutadapt_1.14 new file mode 120000 index 00000000..33552e9c --- /dev/null +++ b/src/.conda_envs/cutadapt_1.14 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/cutadapt_1.14 \ No newline at end of file diff --git a/src/.conda_envs/cutadapt_2.4 b/src/.conda_envs/cutadapt_2.4 new file mode 120000 index 00000000..c2ab68ca --- /dev/null +++ b/src/.conda_envs/cutadapt_2.4 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/cutadapt_2.4 \ No newline at end of file diff --git a/src/.conda_envs/deeptools_3.0.2 b/src/.conda_envs/deeptools_3.0.2 new file mode 120000 index 00000000..514f9cd8 --- /dev/null +++ b/src/.conda_envs/deeptools_3.0.2 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/deeptools_3.0.2 \ No newline at end of file diff --git a/src/.conda_envs b/src/.conda_envs/envs similarity index 100% rename from src/.conda_envs rename to src/.conda_envs/envs diff --git a/src/.conda_envs/fastp_0.19.7 b/src/.conda_envs/fastp_0.19.7 new file mode 120000 index 00000000..325a0da0 --- /dev/null +++ b/src/.conda_envs/fastp_0.19.7 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/fastp_0.19.7 \ No newline at end of file diff --git a/src/.conda_envs/fastqc_0.11.5 b/src/.conda_envs/fastqc_0.11.5 new file mode 120000 index 00000000..73298f6f --- /dev/null +++ b/src/.conda_envs/fastqc_0.11.5 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/fastqc_0.11.5 \ No newline at end of file diff --git a/src/.conda_envs/flexi-splitter_1.0.0 b/src/.conda_envs/flexi-splitter_1.0.0 new file mode 120000 index 00000000..48e58235 --- /dev/null +++ b/src/.conda_envs/flexi-splitter_1.0.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/flexi-splitter_1.0.0 \ No newline at end of file diff --git a/src/.conda_envs/gatk_3.8 b/src/.conda_envs/gatk_3.8 new file mode 120000 index 00000000..63462f44 --- /dev/null +++ b/src/.conda_envs/gatk_3.8 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/gatk_3.8 \ No newline at end of file diff --git a/src/.conda_envs/hisat2_2.0.0 b/src/.conda_envs/hisat2_2.0.0 new file mode 120000 index 00000000..31d43002 --- /dev/null +++ b/src/.conda_envs/hisat2_2.0.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/hisat2_2.0.0 \ No newline at end of file diff --git a/src/.conda_envs/hisat2_2.1.0 b/src/.conda_envs/hisat2_2.1.0 new file mode 120000 index 00000000..2a26ea5b --- /dev/null +++ b/src/.conda_envs/hisat2_2.1.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/hisat2_2.1.0 \ No newline at end of file diff --git a/src/.conda_envs/htseq_0.11.2 b/src/.conda_envs/htseq_0.11.2 new file mode 120000 index 00000000..512c5ab4 --- /dev/null +++ b/src/.conda_envs/htseq_0.11.2 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/htseq_0.11.2 \ No newline at end of file diff --git a/src/.conda_envs/htseq_0.9.1 b/src/.conda_envs/htseq_0.9.1 new file mode 120000 index 00000000..a0b11c0b --- /dev/null +++ b/src/.conda_envs/htseq_0.9.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/htseq_0.9.1 \ No newline at end of file diff --git a/src/.conda_envs/kallisto_0.43.1 b/src/.conda_envs/kallisto_0.43.1 new file mode 120000 index 00000000..f97de91a --- /dev/null +++ b/src/.conda_envs/kallisto_0.43.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/kallisto_0.43.1 \ No newline at end of file diff --git a/src/.conda_envs/kallisto_0.44.0 b/src/.conda_envs/kallisto_0.44.0 new file mode 120000 index 00000000..63b3d7d5 --- /dev/null +++ b/src/.conda_envs/kallisto_0.44.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/kallisto_0.44.0 \ No newline at end of file diff --git a/src/.conda_envs/liftover_357 b/src/.conda_envs/liftover_357 new file mode 120000 index 00000000..ba72fec9 --- /dev/null +++ b/src/.conda_envs/liftover_357 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/liftover_357 \ No newline at end of file diff --git a/src/.conda_envs/macs2_2.1.2 b/src/.conda_envs/macs2_2.1.2 new file mode 120000 index 00000000..d14a7fd7 --- /dev/null +++ b/src/.conda_envs/macs2_2.1.2 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/macs2_2.1.2 \ No newline at end of file diff --git a/src/.conda_envs/multiqc_0.9 b/src/.conda_envs/multiqc_0.9 new file mode 120000 index 00000000..57372d0c --- /dev/null +++ b/src/.conda_envs/multiqc_0.9 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/multiqc_0.9 \ No newline at end of file diff --git a/src/.conda_envs/multiqc_1.0 b/src/.conda_envs/multiqc_1.0 new file mode 120000 index 00000000..db90e686 --- /dev/null +++ b/src/.conda_envs/multiqc_1.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/multiqc_1.0 \ No newline at end of file diff --git a/src/.conda_envs/multiqc_1.7 b/src/.conda_envs/multiqc_1.7 new file mode 120000 index 00000000..46bbaff8 --- /dev/null +++ b/src/.conda_envs/multiqc_1.7 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/multiqc_1.7 \ No newline at end of file diff --git a/src/.conda_envs/music_1.0.0 b/src/.conda_envs/music_1.0.0 new file mode 120000 index 00000000..c451a47d --- /dev/null +++ b/src/.conda_envs/music_1.0.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/music_1.0.0 \ No newline at end of file diff --git a/src/.conda_envs/nextflow_0.25.1 b/src/.conda_envs/nextflow_0.25.1 new file mode 120000 index 00000000..b419d0ba --- /dev/null +++ b/src/.conda_envs/nextflow_0.25.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/nextflow_0.25.1 \ No newline at end of file diff --git a/src/.conda_envs/nextflow_0.28.2 b/src/.conda_envs/nextflow_0.28.2 new file mode 120000 index 00000000..d6f5f3dc --- /dev/null +++ b/src/.conda_envs/nextflow_0.28.2 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/nextflow_0.28.2 \ No newline at end of file diff --git a/src/.conda_envs/nextflow_0.32.0 b/src/.conda_envs/nextflow_0.32.0 new file mode 120000 index 00000000..439a1521 --- /dev/null +++ b/src/.conda_envs/nextflow_0.32.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/nextflow_0.32.0 \ No newline at end of file diff --git a/src/.conda_envs/nextflow_19.01.0 b/src/.conda_envs/nextflow_19.01.0 new file mode 120000 index 00000000..18a20221 --- /dev/null +++ b/src/.conda_envs/nextflow_19.01.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/nextflow_19.01.0 \ No newline at end of file diff --git a/src/.conda_envs/picard_2.18.11 b/src/.conda_envs/picard_2.18.11 new file mode 120000 index 00000000..cbf205fe --- /dev/null +++ b/src/.conda_envs/picard_2.18.11 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/picard_2.18.11 \ No newline at end of file diff --git a/src/.conda_envs/pigz_2.3.4 b/src/.conda_envs/pigz_2.3.4 new file mode 120000 index 00000000..33455f84 --- /dev/null +++ b/src/.conda_envs/pigz_2.3.4 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/pigz_2.3.4 \ No newline at end of file diff --git a/src/.conda_envs/prinseq_0.20.4 b/src/.conda_envs/prinseq_0.20.4 new file mode 120000 index 00000000..dca20610 --- /dev/null +++ b/src/.conda_envs/prinseq_0.20.4 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/prinseq_0.20.4 \ No newline at end of file diff --git a/src/.conda_envs/ribotish_0.2.4 b/src/.conda_envs/ribotish_0.2.4 new file mode 120000 index 00000000..173ef748 --- /dev/null +++ b/src/.conda_envs/ribotish_0.2.4 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/ribotish_0.2.4 \ No newline at end of file diff --git a/src/.conda_envs/rsem_1.3.0 b/src/.conda_envs/rsem_1.3.0 new file mode 120000 index 00000000..cea23372 --- /dev/null +++ b/src/.conda_envs/rsem_1.3.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/rsem_1.3.0 \ No newline at end of file diff --git a/src/.conda_envs/rsem_1.3.1 b/src/.conda_envs/rsem_1.3.1 new file mode 120000 index 00000000..325fb238 --- /dev/null +++ b/src/.conda_envs/rsem_1.3.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/rsem_1.3.1 \ No newline at end of file diff --git a/src/.conda_envs/salmon_0.8.2 b/src/.conda_envs/salmon_0.8.2 new file mode 120000 index 00000000..65b04e4b --- /dev/null +++ b/src/.conda_envs/salmon_0.8.2 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/salmon_0.8.2 \ No newline at end of file diff --git a/src/.conda_envs/samblaster_0.1.24 b/src/.conda_envs/samblaster_0.1.24 new file mode 120000 index 00000000..d0093267 --- /dev/null +++ b/src/.conda_envs/samblaster_0.1.24 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/samblaster_0.1.24 \ No newline at end of file diff --git a/src/.conda_envs/samtools_1.5 b/src/.conda_envs/samtools_1.5 new file mode 120000 index 00000000..cab31c46 --- /dev/null +++ b/src/.conda_envs/samtools_1.5 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/samtools_1.5 \ No newline at end of file diff --git a/src/.conda_envs/samtools_1.7 b/src/.conda_envs/samtools_1.7 new file mode 120000 index 00000000..29a7fb1e --- /dev/null +++ b/src/.conda_envs/samtools_1.7 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/samtools_1.7 \ No newline at end of file diff --git a/src/.conda_envs/seaborn_0.9.0 b/src/.conda_envs/seaborn_0.9.0 new file mode 120000 index 00000000..dedf18f4 --- /dev/null +++ b/src/.conda_envs/seaborn_0.9.0 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/seaborn_0.9.0 \ No newline at end of file diff --git a/src/.conda_envs/splicing_lore_env b/src/.conda_envs/splicing_lore_env new file mode 120000 index 00000000..f5570a06 --- /dev/null +++ b/src/.conda_envs/splicing_lore_env @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/splicing_lore_env \ No newline at end of file diff --git a/src/.conda_envs/sra-tools_2.8.2 b/src/.conda_envs/sra-tools_2.8.2 new file mode 120000 index 00000000..a01645bc --- /dev/null +++ b/src/.conda_envs/sra-tools_2.8.2 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/sra-tools_2.8.2 \ No newline at end of file diff --git a/src/.conda_envs/star_2.5.3a b/src/.conda_envs/star_2.5.3a new file mode 120000 index 00000000..6030edb0 --- /dev/null +++ b/src/.conda_envs/star_2.5.3a @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/star_2.5.3a \ No newline at end of file diff --git a/src/.conda_envs/star_2.7.0e b/src/.conda_envs/star_2.7.0e new file mode 120000 index 00000000..b8cafd08 --- /dev/null +++ b/src/.conda_envs/star_2.7.0e @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/star_2.7.0e \ No newline at end of file diff --git a/src/.conda_envs/star_2.7.3a b/src/.conda_envs/star_2.7.3a new file mode 120000 index 00000000..c25c3a3c --- /dev/null +++ b/src/.conda_envs/star_2.7.3a @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/star_2.7.3a \ No newline at end of file diff --git a/src/.conda_envs/subread_1.6.4 b/src/.conda_envs/subread_1.6.4 new file mode 120000 index 00000000..e7bba79d --- /dev/null +++ b/src/.conda_envs/subread_1.6.4 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/subread_1.6.4 \ No newline at end of file diff --git a/src/.conda_envs/tophat_2.1.1 b/src/.conda_envs/tophat_2.1.1 new file mode 120000 index 00000000..6bb53f91 --- /dev/null +++ b/src/.conda_envs/tophat_2.1.1 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/tophat_2.1.1 \ No newline at end of file diff --git a/src/.conda_envs/trimmomatic_0.36 b/src/.conda_envs/trimmomatic_0.36 new file mode 120000 index 00000000..77753a1c --- /dev/null +++ b/src/.conda_envs/trimmomatic_0.36 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/trimmomatic_0.36 \ No newline at end of file diff --git a/src/.conda_envs/trimmomatic_0.39 b/src/.conda_envs/trimmomatic_0.39 new file mode 120000 index 00000000..81502468 --- /dev/null +++ b/src/.conda_envs/trimmomatic_0.39 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/trimmomatic_0.39 \ No newline at end of file diff --git a/src/.conda_envs/ucsc_375 b/src/.conda_envs/ucsc_375 new file mode 120000 index 00000000..406934cb --- /dev/null +++ b/src/.conda_envs/ucsc_375 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/ucsc_375 \ No newline at end of file diff --git a/src/.conda_envs/umitools_0.3.4 b/src/.conda_envs/umitools_0.3.4 new file mode 120000 index 00000000..1fbf3fc6 --- /dev/null +++ b/src/.conda_envs/umitools_0.3.4 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/umitools_0.3.4 \ No newline at end of file diff --git a/src/.conda_envs/urqt_d62c1f8 b/src/.conda_envs/urqt_d62c1f8 new file mode 120000 index 00000000..bb665c60 --- /dev/null +++ b/src/.conda_envs/urqt_d62c1f8 @@ -0,0 +1 @@ +/Xnfs/lbmcdb/common/conda/envs/urqt_d62c1f8 \ No newline at end of file -- GitLab