diff --git a/src/.docker_modules/bcftools/1.7/docker_init.sh b/src/.docker_modules/bcftools/1.7/docker_init.sh index 043a63f0e984eb54c108f2baf27ce896dd71dfef..9fea98d180dfcb61bf25fee66a507f2c03d5c330 100755 --- a/src/.docker_modules/bcftools/1.7/docker_init.sh +++ b/src/.docker_modules/bcftools/1.7/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/bcftools/1.7 -t 'lbmc/bcftools:1.7' +docker build src/.docker_modules/bcftools/1.7 -t 'lbmc/bcftools:1.7' +docker push lbmc/bcftools:1.7 diff --git a/src/.docker_modules/bedtools/2.25.0/docker_init.sh b/src/.docker_modules/bedtools/2.25.0/docker_init.sh index 37c05b9d296cb3168afbab20d4ff105ccf3e56c4..e95165abffc20fd2665b5f0a5042c48a2ea121b8 100755 --- a/src/.docker_modules/bedtools/2.25.0/docker_init.sh +++ b/src/.docker_modules/bedtools/2.25.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/bedtools/2.25.0 -t 'lbmc/bedtools:2.25.0' +docker build src/.docker_modules/bedtools/2.25.0 -t 'lbmc/bedtools:2.25.0' +docker push lbmc/bedtools:2.25.0 diff --git a/src/.docker_modules/bioawk/1.0/docker_init.sh b/src/.docker_modules/bioawk/1.0/docker_init.sh index abbb1e237459d0b8398add029b37de9a1af344b9..5070477487da743e74fc262ac9a34d7ace361b5d 100755 --- a/src/.docker_modules/bioawk/1.0/docker_init.sh +++ b/src/.docker_modules/bioawk/1.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/bioawk/1.0 -t 'lbmc/bioawk:1.0' +docker build src/.docker_modules/bioawk/1.0 -t 'lbmc/bioawk:1.0' +docker push lbmc/bioawk:1.0 diff --git a/src/.docker_modules/bowtie/1.2.2/docker_init.sh b/src/.docker_modules/bowtie/1.2.2/docker_init.sh index 46f450277569b3d167001c93f43fdd2e57916efa..0328b0363297f1ee0bd2ec96b57e79e2179cbb5e 100755 --- a/src/.docker_modules/bowtie/1.2.2/docker_init.sh +++ b/src/.docker_modules/bowtie/1.2.2/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/bowtie/1.2.2 -t 'lbmc/bowtie:1.2.2' +docker build src/.docker_modules/bowtie/1.2.2 -t 'lbmc/bowtie:1.2.2' +docker push lbmc/bowtie:1.2.2 diff --git a/src/.docker_modules/bowtie2/2.3.4.1/docker_init.sh b/src/.docker_modules/bowtie2/2.3.4.1/docker_init.sh index 83cc97d23b38571387474fee55dc7b7ba06e43aa..b3ff515edc482be70c76d7090c2a9b54eb793645 100755 --- a/src/.docker_modules/bowtie2/2.3.4.1/docker_init.sh +++ b/src/.docker_modules/bowtie2/2.3.4.1/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/bowtie2/2.3.4.1 -t 'lbmc/bowtie2:2.3.4.1' +docker build src/.docker_modules/bowtie2/2.3.4.1 -t 'lbmc/bowtie2:2.3.4.1' +docker push lbmc/bowtie2:2.3.4.1 diff --git a/src/.docker_modules/bwa/0.7.17/docker_init.sh b/src/.docker_modules/bwa/0.7.17/docker_init.sh index 1b1f27f1a6df201cc8de7ec808f3094574464efb..559e37b97fb58dae24de28d3e33eea92c590ee01 100755 --- a/src/.docker_modules/bwa/0.7.17/docker_init.sh +++ b/src/.docker_modules/bwa/0.7.17/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/bwa/0.7.17 -t 'lbmc/bwa:0.7.17' +docker build src/.docker_modules/bwa/0.7.17 -t 'lbmc/bwa:0.7.17' +docker push lbmc/bwa:0.7.17 diff --git a/src/.docker_modules/canu/1.6/docker_init.sh b/src/.docker_modules/canu/1.6/docker_init.sh index 0b96ce1ed5dca35872982c2a8a8d5a93bf111076..ed22a43341d019441e0bf083c68148ddfb6a065d 100755 --- a/src/.docker_modules/canu/1.6/docker_init.sh +++ b/src/.docker_modules/canu/1.6/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/canu/1.6 -t 'lbmc/canu:1.6' +docker build src/.docker_modules/canu/1.6 -t 'lbmc/canu:1.6' +docker push lbmc/canu:1.6 diff --git a/src/.docker_modules/cutadapt/1.14/docker_init.sh b/src/.docker_modules/cutadapt/1.14/docker_init.sh index 7390c9f69d501317b76197e3d6a72258aa7f4eca..e0821b65d3cc1408e80497f8583a202c30030a42 100755 --- a/src/.docker_modules/cutadapt/1.14/docker_init.sh +++ b/src/.docker_modules/cutadapt/1.14/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/cutadapt/1.14 -t 'lbmc/cutadapt:1.14' +docker build src/.docker_modules/cutadapt/1.14 -t 'lbmc/cutadapt:1.14' +docker push lbmc/cutadapt:1.14 diff --git a/src/.docker_modules/cutadapt/1.15/docker_init.sh b/src/.docker_modules/cutadapt/1.15/docker_init.sh index c5ead618afb680b467044ba43e5c262893a3f5a8..ed6c9837f4007110cbd044f74b6fc88a80b1aee9 100755 --- a/src/.docker_modules/cutadapt/1.15/docker_init.sh +++ b/src/.docker_modules/cutadapt/1.15/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/cutadapt/1.15 -t 'lbmc/cutadapt:1.15' +docker build src/.docker_modules/cutadapt/1.15 -t 'lbmc/cutadapt:1.15' +docker push lbmc/cutadapt:1.15 diff --git a/src/.docker_modules/cutadapt/2.1/docker_init.sh b/src/.docker_modules/cutadapt/2.1/docker_init.sh index 4b55d68ea92596035f0b8d97dd96b526fefae8b7..92b62694e656ca9347d8e895abce6d16ae5194c1 100755 --- a/src/.docker_modules/cutadapt/2.1/docker_init.sh +++ b/src/.docker_modules/cutadapt/2.1/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/cutadapt/2.1 -t 'lbmc/cutadapt:2.1' +docker build src/.docker_modules/cutadapt/2.1 -t 'lbmc/cutadapt:2.1' +docker push lbmc/cutadapt:2.1 diff --git a/src/.docker_modules/deeptools/3.0.2/docker_init.sh b/src/.docker_modules/deeptools/3.0.2/docker_init.sh index cb392df1f7eaff43aa6d069d500fdd1da92a3ca8..4ec75a192605ccd7b9796a33e3441cdb4710c4bc 100755 --- a/src/.docker_modules/deeptools/3.0.2/docker_init.sh +++ b/src/.docker_modules/deeptools/3.0.2/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/deeptools/3.0.2 -t 'lbmc/deeptools:3.0.2' +docker build src/.docker_modules/deeptools/3.0.2 -t 'lbmc/deeptools:3.0.2' +docker push lbmc/deeptools:3.0.2 diff --git a/src/.docker_modules/deeptools/3.1.1/docker_init.sh b/src/.docker_modules/deeptools/3.1.1/docker_init.sh index 7f0e94ff8d6744ec40054797874c33dd82270ba4..ef698402e9a5fb7e2b2ade8c7bc40af5660cb203 100755 --- a/src/.docker_modules/deeptools/3.1.1/docker_init.sh +++ b/src/.docker_modules/deeptools/3.1.1/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/deeptools/3.1.1 -t 'lbmc/deeptools:3.1.1' +docker build src/.docker_modules/deeptools/3.1.1 -t 'lbmc/deeptools:3.1.1' +docker push lbmc/deeptools:3.1.1 diff --git a/src/.docker_modules/fastp/0.19.7/docker_init.sh b/src/.docker_modules/fastp/0.19.7/docker_init.sh index 51b7257985e9834345abaffba6681b7913e2b117..48c21ffa3a246eddb5d7a83c1ddef677a9049070 100755 --- a/src/.docker_modules/fastp/0.19.7/docker_init.sh +++ b/src/.docker_modules/fastp/0.19.7/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/fastp/0.19.7 -t 'lbmc/fastp:0.19.7' +docker build src/.docker_modules/fastp/0.19.7 -t 'lbmc/fastp:0.19.7' +docker push lbmc/fastp:0.19.7 diff --git a/src/.docker_modules/fastqc/0.11.5/docker_init.sh b/src/.docker_modules/fastqc/0.11.5/docker_init.sh index d42d456c49351557ff900ae3b07eace5f9937fea..fd62c47bb639b8bdd1dc38c34b26612336bc73e6 100755 --- a/src/.docker_modules/fastqc/0.11.5/docker_init.sh +++ b/src/.docker_modules/fastqc/0.11.5/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/fastqc/0.11.5 -t 'lbmc/fastqc:0.11.5' +docker build src/.docker_modules/fastqc/0.11.5 -t 'lbmc/fastqc:0.11.5' +docker push lbmc/fastqc:0.11.5 diff --git a/src/.docker_modules/file_handle/0.1.1/docker_init.sh b/src/.docker_modules/file_handle/0.1.1/docker_init.sh index 8fbeec247b4fc96f3c93045d6abf6b304514a4e4..1dded20bfa792030d901ac08086a12e48f29bf0b 100755 --- a/src/.docker_modules/file_handle/0.1.1/docker_init.sh +++ b/src/.docker_modules/file_handle/0.1.1/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/file_handle/0.1.1 -t 'lbmc/file_handle:0.1.1' +docker build src/.docker_modules/file_handle/0.1.1 -t 'lbmc/file_handle:0.1.1' +docker push lbmc/file_handle:0.1.1 diff --git a/src/.docker_modules/gatk/4.0.8.1/docker_init.sh b/src/.docker_modules/gatk/4.0.8.1/docker_init.sh index 5363165595215e90d94fd0bfdea60e0a47aea019..8df1ea88c7f35dd3833eb111af65edb4fa4df904 100755 --- a/src/.docker_modules/gatk/4.0.8.1/docker_init.sh +++ b/src/.docker_modules/gatk/4.0.8.1/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/gatk/4.0.8.1 -t 'lbmc/gatk:4.0.8.1' +docker build src/.docker_modules/gatk/4.0.8.1 -t 'lbmc/gatk:4.0.8.1' +docker push lbmc/gatk:4.0.8.1 diff --git a/src/.docker_modules/hisat2/2.0.0/docker_init.sh b/src/.docker_modules/hisat2/2.0.0/docker_init.sh index cff5d127d39515485f22b7b8a5db12125ff6c77a..eae7c398c5b5a8a8bab9e3ce8663c462b69fac97 100755 --- a/src/.docker_modules/hisat2/2.0.0/docker_init.sh +++ b/src/.docker_modules/hisat2/2.0.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/hisat2/2.0.0 -t 'lbmc/hisat2:2.0.0' +docker build src/.docker_modules/hisat2/2.0.0 -t 'lbmc/hisat2:2.0.0' +docker push lbmc/hisat2:2.0.0 diff --git a/src/.docker_modules/hisat2/2.1.0/docker_init.sh b/src/.docker_modules/hisat2/2.1.0/docker_init.sh index bbae87cee302e3603942594aa4aa59e967065f48..b25f8ac20b80f990f761c202ddfeeefa3f00826d 100755 --- a/src/.docker_modules/hisat2/2.1.0/docker_init.sh +++ b/src/.docker_modules/hisat2/2.1.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/hisat2/2.1.0 -t 'lbmc/hisat2:2.1.0' +docker build src/.docker_modules/hisat2/2.1.0 -t 'lbmc/hisat2:2.1.0' +docker push lbmc/hisat2:2.1.0 diff --git a/src/.docker_modules/htseq/0.11.2/docker_init.sh b/src/.docker_modules/htseq/0.11.2/docker_init.sh index f2ead7224e493d65290516a6ef40743a7aece6a6..d697a6244d798a03497f19dd206a156b615f9c2f 100755 --- a/src/.docker_modules/htseq/0.11.2/docker_init.sh +++ b/src/.docker_modules/htseq/0.11.2/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/htseq/0.11.2 -t 'lbmc/htseq:0.11.2' +docker build src/.docker_modules/htseq/0.11.2 -t 'lbmc/htseq:0.11.2' +docker push lbmc/htseq:0.11.2 diff --git a/src/.docker_modules/htseq/0.8.0/docker_init.sh b/src/.docker_modules/htseq/0.8.0/docker_init.sh index 09cf7277aeb245bba90da7a4ea48fb89cbb058fd..d41dc8c712678dbc689dbe0febeb7be7cff189be 100755 --- a/src/.docker_modules/htseq/0.8.0/docker_init.sh +++ b/src/.docker_modules/htseq/0.8.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/htseq/0.8.0 -t 'lbmc/htseq:0.8.0' +docker build src/.docker_modules/htseq/0.8.0 -t 'lbmc/htseq:0.8.0' +docker push lbmc/htseq:0.8.0 diff --git a/src/.docker_modules/kallisto/0.43.1/docker_init.sh b/src/.docker_modules/kallisto/0.43.1/docker_init.sh index 1ff3aca3d1b7e8b34326f44230be85fa5be9c5df..384eb6a010a2562a4f1f3c9b5dcf1a59c85e99c6 100755 --- a/src/.docker_modules/kallisto/0.43.1/docker_init.sh +++ b/src/.docker_modules/kallisto/0.43.1/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/kallisto/0.43.1 -t 'lbmc/kallisto:0.43.1' +docker build src/.docker_modules/kallisto/0.43.1 -t 'lbmc/kallisto:0.43.1' +docker push lbmc/kallisto:0.43.1 diff --git a/src/.docker_modules/kallisto/0.44.0/docker_init.sh b/src/.docker_modules/kallisto/0.44.0/docker_init.sh index 9e071b69f7892bcb3bc01b0e900a83ccbccc9c35..e74899cb372399aa3decfd9fbd18934c077527b3 100755 --- a/src/.docker_modules/kallisto/0.44.0/docker_init.sh +++ b/src/.docker_modules/kallisto/0.44.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/kallisto/0.44.0 -t 'lbmc/kallisto:0.44.0' +docker build src/.docker_modules/kallisto/0.44.0 -t 'lbmc/kallisto:0.44.0' +docker push lbmc/kallisto:0.44.0 diff --git a/src/.docker_modules/macs2/2.1.2/docker_init.sh b/src/.docker_modules/macs2/2.1.2/docker_init.sh index 02e9a3825b471442a9b96dfa9a00ddaa44e7f648..2676105e6f16c051acff170608f16f1245ac5d32 100755 --- a/src/.docker_modules/macs2/2.1.2/docker_init.sh +++ b/src/.docker_modules/macs2/2.1.2/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/macs2/2.1.2 -t 'lbmc/macs2:2.1.2' +docker build src/.docker_modules/macs2/2.1.2 -t 'lbmc/macs2:2.1.2' +docker push lbmc/macs2:2.1.2 diff --git a/src/.docker_modules/multiqc/1.0/docker_init.sh b/src/.docker_modules/multiqc/1.0/docker_init.sh index 0bab07619a87b9f6df257a649a221b1be7a265e0..f71a91645447f9d02098844c1864e2ed5ddff33b 100755 --- a/src/.docker_modules/multiqc/1.0/docker_init.sh +++ b/src/.docker_modules/multiqc/1.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/multiqc/1.0 -t 'lbmc/multiqc:1.0' +docker build src/.docker_modules/multiqc/1.0 -t 'lbmc/multiqc:1.0' +docker push lbmc/multiqc:1.0 diff --git a/src/.docker_modules/multiqc/1.7/docker_init.sh b/src/.docker_modules/multiqc/1.7/docker_init.sh index fb08cc126bc9a242ca3dde042867ec78a08676bf..926ffe1b24af5809f7273a72ddd18efa7fb26767 100755 --- a/src/.docker_modules/multiqc/1.7/docker_init.sh +++ b/src/.docker_modules/multiqc/1.7/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/multiqc/1.7 -t 'lbmc/multiqc:1.7' +docker build src/.docker_modules/multiqc/1.7 -t 'lbmc/multiqc:1.7' +docker push lbmc/multiqc:1.7 diff --git a/src/.docker_modules/music/6613c53/docker_init.sh b/src/.docker_modules/music/6613c53/docker_init.sh index 3666dfaab151065a918b01dab0b54ffe56094b9c..9bcf3037872f3fa37a22b0c70d46affb44e1b610 100755 --- a/src/.docker_modules/music/6613c53/docker_init.sh +++ b/src/.docker_modules/music/6613c53/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/music/6613c53 -t 'lbmc/music:6613c53' +docker build src/.docker_modules/music/6613c53 -t 'lbmc/music:6613c53' +docker push lbmc/music:6613c53 diff --git a/src/.docker_modules/picard/2.18.11/docker_init.sh b/src/.docker_modules/picard/2.18.11/docker_init.sh index 3dc1585140b5891513796d6c4c891c7103aead8f..2bd4802e445d8127ceada67e30e4449d4712b0c3 100755 --- a/src/.docker_modules/picard/2.18.11/docker_init.sh +++ b/src/.docker_modules/picard/2.18.11/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/picard/2.18.11 -t 'lbmc/picard:2.18.11' +docker build src/.docker_modules/picard/2.18.11 -t 'lbmc/picard:2.18.11' +docker push lbmc/picard:2.18.11 diff --git a/src/.docker_modules/pigz/2.4/docker_init.sh b/src/.docker_modules/pigz/2.4/docker_init.sh index 84e508a43ec9dbd99fe61eabc74ee345462c64da..2c473f11e9aa2b5d98a315c2ea5c8f8a88307eb5 100755 --- a/src/.docker_modules/pigz/2.4/docker_init.sh +++ b/src/.docker_modules/pigz/2.4/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/pigz/2.4 -t 'lbmc/pigz:2.4' +docker build src/.docker_modules/pigz/2.4 -t 'lbmc/pigz:2.4' +docker push lbmc/pigz:2.4 diff --git a/src/.docker_modules/python/3.8/docker_init.sh b/src/.docker_modules/python/3.8/docker_init.sh index 18b86e72fade35ff21ce512c4324854ffef60dee..a0357e76802fab2fdc34e57b8870eead03c8f562 100755 --- a/src/.docker_modules/python/3.8/docker_init.sh +++ b/src/.docker_modules/python/3.8/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/python/3.8 -t 'lbmc/python:3.8' +docker build src/.docker_modules/python/3.8 -t 'lbmc/python:3.8' +docker push lbmc/python:3.8 diff --git a/src/.docker_modules/r/3.5.3/docker_init.sh b/src/.docker_modules/r/3.5.3/docker_init.sh index e9cb205ec1e58e59e252afedde722ddc8cc8e825..8e587ecb0ab5e4590d8a72d0619e9d156bc49902 100755 --- a/src/.docker_modules/r/3.5.3/docker_init.sh +++ b/src/.docker_modules/r/3.5.3/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/r/3.5.3 -t 'lbmc/r:3.5.3' +docker build src/.docker_modules/r/3.5.3 -t 'lbmc/r:3.5.3' +docker push lbmc/r:3.5.3 diff --git a/src/.docker_modules/rsem/1.3.0/docker_init.sh b/src/.docker_modules/rsem/1.3.0/docker_init.sh index 2907c0ea05d66a5b684c5844bfc3688d8bce2540..14a4a6e4f64f2732c639a91fac4eabeaf79f23a8 100755 --- a/src/.docker_modules/rsem/1.3.0/docker_init.sh +++ b/src/.docker_modules/rsem/1.3.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/rsem/1.3.0 -t 'lbmc/rsem:1.3.0' +docker build src/.docker_modules/rsem/1.3.0 -t 'lbmc/rsem:1.3.0' +docker push lbmc/rsem:1.3.0 diff --git a/src/.docker_modules/salmon/0.8.2/docker_init.sh b/src/.docker_modules/salmon/0.8.2/docker_init.sh index 3a776c0845c5c4cc75e408601af7b22db7108e8f..59477e7dff874810d5da384507200a12711a1461 100755 --- a/src/.docker_modules/salmon/0.8.2/docker_init.sh +++ b/src/.docker_modules/salmon/0.8.2/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/salmon/0.8.2 -t 'lbmc/salmon:0.8.2' +docker build src/.docker_modules/salmon/0.8.2 -t 'lbmc/salmon:0.8.2' +docker push lbmc/salmon:0.8.2 diff --git a/src/.docker_modules/sambamba/0.6.7/docker_init.sh b/src/.docker_modules/sambamba/0.6.7/docker_init.sh index d203b20ca443ea044d4c45b69f4f17f9f8cff553..bf65bcbe7f9d4f7c55ca351699721ecbf600ec91 100755 --- a/src/.docker_modules/sambamba/0.6.7/docker_init.sh +++ b/src/.docker_modules/sambamba/0.6.7/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/sambamba/0.6.7 -t 'lbmc/sambamba:0.6.7' +docker build src/.docker_modules/sambamba/0.6.7 -t 'lbmc/sambamba:0.6.7' +docker push lbmc/sambamba:0.6.7 diff --git a/src/.docker_modules/sambamba/0.6.9/docker_init.sh b/src/.docker_modules/sambamba/0.6.9/docker_init.sh index 5a0e2fcc74c8cbd17f4e4130af9ca83cee295a61..d740a4f22a0bdb5ad1c38faa8f7125463fca42ae 100755 --- a/src/.docker_modules/sambamba/0.6.9/docker_init.sh +++ b/src/.docker_modules/sambamba/0.6.9/docker_init.sh @@ -1,2 +1,4 @@ #!/bin/sh docker build src/.docker_modules/sambamba/0.6.9 -t 'lbmc/sambamba:0.6.9' +docker push lbmc/sambamba:0.6.9 +docker push lbmc/sambamba:0.6.9 diff --git a/src/.docker_modules/samblaster/0.1.24/docker_init.sh b/src/.docker_modules/samblaster/0.1.24/docker_init.sh index 991b92cbacb705e7528f79e153778c51eda8d0b4..4fb8a737690903753b7e719a8e7d0926798bb0e6 100755 --- a/src/.docker_modules/samblaster/0.1.24/docker_init.sh +++ b/src/.docker_modules/samblaster/0.1.24/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/samblaster/0.1.24 -t 'lbmc/samblaster:0.1.24' +docker build src/.docker_modules/samblaster/0.1.24 -t 'lbmc/samblaster:0.1.24' +docker push lbmc/samblaster:0.1.24 diff --git a/src/.docker_modules/samtools/1.7/docker_init.sh b/src/.docker_modules/samtools/1.7/docker_init.sh index 4c47e22b0541c7d7e02a9834e1efd09799ca16f8..a5819309117ae9ced1c4ba7af0475e561bf83e60 100755 --- a/src/.docker_modules/samtools/1.7/docker_init.sh +++ b/src/.docker_modules/samtools/1.7/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/samtools/1.7 -t 'lbmc/samtools:1.7' +docker build src/.docker_modules/samtools/1.7 -t 'lbmc/samtools:1.7' +docker push lbmc/samtools:1.7 diff --git a/src/.docker_modules/sratoolkit/2.8.2/docker_init.sh b/src/.docker_modules/sratoolkit/2.8.2/docker_init.sh index a7f547e1248b7908dafd47755189d63adde9736e..759c2835708a4d4448fea6f32d7f4a55796ace86 100755 --- a/src/.docker_modules/sratoolkit/2.8.2/docker_init.sh +++ b/src/.docker_modules/sratoolkit/2.8.2/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/sratoolkit/2.8.2 -t 'lbmc/sratoolkit:2.8.2' +docker build src/.docker_modules/sratoolkit/2.8.2 -t 'lbmc/sratoolkit:2.8.2' +docker push lbmc/sratoolkit:2.8.2 diff --git a/src/.docker_modules/star/2.7.3a/docker_init.sh b/src/.docker_modules/star/2.7.3a/docker_init.sh index 0e048f27741e5f245374cb5be304381cbd4035db..c3e325fb8a227bd6ab3ab97876402afeca1fbceb 100755 --- a/src/.docker_modules/star/2.7.3a/docker_init.sh +++ b/src/.docker_modules/star/2.7.3a/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh docker build src/.docker_modules/star/2.7.3a/ -t 'lbmc/star:2.7.3a' +docker push lbmc/star:2.7.3a diff --git a/src/.docker_modules/subread/1.6.4/docker_init.sh b/src/.docker_modules/subread/1.6.4/docker_init.sh index 574c2031d72ff9fd18760ab237dd4496f469a8d2..9e8dc1571ace4feab11ab65f79329cf30277a0aa 100755 --- a/src/.docker_modules/subread/1.6.4/docker_init.sh +++ b/src/.docker_modules/subread/1.6.4/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/subread/1.6.4 -t 'lbmc/subread:1.6.4' +docker build src/.docker_modules/subread/1.6.4 -t 'lbmc/subread:1.6.4' +docker push lbmc/subread:1.6.4 diff --git a/src/.docker_modules/tophat/2.1.1/docker_init.sh b/src/.docker_modules/tophat/2.1.1/docker_init.sh index a6125a865514cedfbb745a2b676d75b3e5cf3c6d..212fb6af8b26325b64747729d1b97534d0ef06d8 100755 --- a/src/.docker_modules/tophat/2.1.1/docker_init.sh +++ b/src/.docker_modules/tophat/2.1.1/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/tophat/2.1.1 -t 'lbmc/tophat:2.1.1' +docker build src/.docker_modules/tophat/2.1.1 -t 'lbmc/tophat:2.1.1' +docker push lbmc/tophat:2.1.1 diff --git a/src/.docker_modules/trimmomatic/0.36/docker_init.sh b/src/.docker_modules/trimmomatic/0.36/docker_init.sh index 27c970f4c29afb81cf7c079349dc35fe89847110..9bcd98b0383e7a0955298d0438c26694aa7f965e 100755 --- a/src/.docker_modules/trimmomatic/0.36/docker_init.sh +++ b/src/.docker_modules/trimmomatic/0.36/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/trimmomatic/0.36 -t 'lbmc/trimmomatic:0.36' +docker build src/.docker_modules/trimmomatic/0.36 -t 'lbmc/trimmomatic:0.36' +docker push lbmc/trimmomatic:0.36 diff --git a/src/.docker_modules/ucsc/375/docker_init.sh b/src/.docker_modules/ucsc/375/docker_init.sh index 5fd1371ccd03f8c12b515884df3ffeea736250b3..e54fadd37b717d09ddef5cf1f92b1b0df81be4c7 100755 --- a/src/.docker_modules/ucsc/375/docker_init.sh +++ b/src/.docker_modules/ucsc/375/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/ucsc/375/ -t 'lbmc/ucsc:375' +docker build src/.docker_modules/ucsc/375/ -t 'lbmc/ucsc:375' +docker push lbmc/ucsc:375 diff --git a/src/.docker_modules/umi_tools/0.5.4/docker_init.sh b/src/.docker_modules/umi_tools/0.5.4/docker_init.sh index 1b11e25daea666b8e9bf130b6a44530194b5bc1c..6314e3f267df56162b9c8c40a131c663a52d1a9b 100755 --- a/src/.docker_modules/umi_tools/0.5.4/docker_init.sh +++ b/src/.docker_modules/umi_tools/0.5.4/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/umi_tools/1.0.0/ -t 'lbmc/umi_tools:1.0.0' +docker build src/.docker_modules/umi_tools/1.0.0/ -t 'lbmc/umi_tools:1.0.0' +docker push lbmc/umi_tools:1.0.0 diff --git a/src/.docker_modules/umi_tools/1.0.0/docker_init.sh b/src/.docker_modules/umi_tools/1.0.0/docker_init.sh index 1b11e25daea666b8e9bf130b6a44530194b5bc1c..6314e3f267df56162b9c8c40a131c663a52d1a9b 100755 --- a/src/.docker_modules/umi_tools/1.0.0/docker_init.sh +++ b/src/.docker_modules/umi_tools/1.0.0/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/umi_tools/1.0.0/ -t 'lbmc/umi_tools:1.0.0' +docker build src/.docker_modules/umi_tools/1.0.0/ -t 'lbmc/umi_tools:1.0.0' +docker push lbmc/umi_tools:1.0.0 diff --git a/src/.docker_modules/urqt/d62c1f8/docker_init.sh b/src/.docker_modules/urqt/d62c1f8/docker_init.sh index bb7f161f02ee44fbab80a034fd954a7e1f4b4051..5e09a84ffceec21c18f7d64811ed640150197a59 100755 --- a/src/.docker_modules/urqt/d62c1f8/docker_init.sh +++ b/src/.docker_modules/urqt/d62c1f8/docker_init.sh @@ -1,2 +1,3 @@ #!/bin/sh -docker build src/docker_modules/urqt/d62c1f8 -t 'lbmc/urqt:d62c1f8' +docker build src/.docker_modules/urqt/d62c1f8 -t 'lbmc/urqt:d62c1f8' +docker push lbmc/urqt:d62c1f8