diff --git a/src/nf_modules/bwa/main.nf b/src/nf_modules/bwa/main.nf index 166be133cfaf7591b97358903bbac0dfd3dcdb2a..998643b5b18ee85f0c66ac354e5f2e0a8c1ada38 100644 --- a/src/nf_modules/bwa/main.nf +++ b/src/nf_modules/bwa/main.nf @@ -10,8 +10,8 @@ process index_fasta { tuple val(file_id), path(fasta) output: - tuple val(fasta.simpleName), path("${fasta.simpleName}.*"), emit: index - file "*_bwa_report.txt", emit: report + tuple val(file_id), path("${fasta.simpleName}.*"), emit: index + tuple val(file_id), path("*_bwa_report.txt"), emit: report script: """