From 1ef49919b46aaf3cc72333863d26a5679b69946f Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 3 May 2021 17:32:42 +0200
Subject: [PATCH] flexi_splitter: fix awk cmd
---
src/nf_modules/flexi_splitter/main.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/nf_modules/flexi_splitter/main.nf b/src/nf_modules/flexi_splitter/main.nf
index 52e556cd..86b9bbd6 100644
--- a/src/nf_modules/flexi_splitter/main.nf
+++ b/src/nf_modules/flexi_splitter/main.nf
@@ -50,7 +50,7 @@ process split_file {
mkdir -p results/
find split -type "f" | \
sed -E "s|(.*/split/(.*)/(.*))|\1 \2_\3|g" |
- awk '{"mv "\$1" results/"\$2"}'
+ awk '{"mv "\$1" results/"\$2}'
rm -Rf split
"""
else
@@ -60,7 +60,7 @@ process split_file {
mkdir -p results/
find split -type "f" | \
sed -E "s|(.*/split/(.*)/(.*))|\1 \2_\3|g" |
- awk '{"mv "\$1" results/"\$2"}'
+ awk '{"mv "\$1" results/"\$2}'
rm -Rf split
"""
}
--
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