From 1afe63eaf03e79f346fdec735e48ddf69b3911ac Mon Sep 17 00:00:00 2001
From: Xavier Grand <xavier.grand@ens-lyon.fr>
Date: Mon, 20 Sep 2021 16:13:18 +0200
Subject: [PATCH] preparation yaml config file
---
src/chipster.nf | 7 ++-----
1 file changed, 2 insertions(+), 5 deletions(-)
diff --git a/src/chipster.nf b/src/chipster.nf
index c79a6616..525d66a8 100755
--- a/src/chipster.nf
+++ b/src/chipster.nf
@@ -49,12 +49,9 @@ utiliser l'oppérateur .join ou .filter
/* Params project Name */
params.project = ""
-/* Params from config file yaml:
-
-
-
-*/
+/* Params from config file yaml: */
+data = params.config.collect {k , v -> "${params.fastq_folder}/${v.fastq.gz}"}
/* Params out */
params.fastp_out = "$params.project/fastp/"
--
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