diff --git a/src/example_variant_calling.nf b/src/example_variant_calling.nf index 5597a1244c85b83c56025d7dcbd9b5b3689bd52c..0c70233069f50464fe2f0ea08481f001b525b15e 100644 --- a/src/example_variant_calling.nf +++ b/src/example_variant_calling.nf @@ -9,7 +9,7 @@ include { } from "./nf_modules/bwa/main.nf" include { - variant_calling_out; + germline_cohort_data_variant_calling; } from "./nf_modules/gatk4/main.nf" addParams( variant_calling_out: "vcf/", )