diff --git a/src/nf_modules/fastqc/main.nf b/src/nf_modules/fastqc/main.nf index 4baa187308f9f2e6e04aa2342dd27e817d60bca8..4a2095014a6af3e8330e8fc13e71c4c191fd4708 100644 --- a/src/nf_modules/fastqc/main.nf +++ b/src/nf_modules/fastqc/main.nf @@ -16,7 +16,7 @@ process fastqc_fastq_pairedend { script: """ fastqc --quiet --threads ${task.cpus} --format fastq --outdir ./ \ -${reads[0]} ${reads[1]} + ${reads[0]} ${reads[1]} """ } @@ -34,7 +34,7 @@ process fastqc_fastq_singleend { script: """ -fastqc --quiet --threads ${task.cpus} --format fastq --outdir ./ ${reads} + fastqc --quiet --threads ${task.cpus} --format fastq --outdir ./ ${reads} """ }