From 015419e53af32cb350aae226a0d6a43eed23bad1 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Thu, 4 Feb 2021 16:07:14 +0100
Subject: [PATCH] solution_RNASeq.nf: update command to launch pipe
---
src/solution_RNASeq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/solution_RNASeq.nf b/src/solution_RNASeq.nf
index f264c380..1f43fd1f 100644
--- a/src/solution_RNASeq.nf
+++ b/src/solution_RNASeq.nf
@@ -1,7 +1,7 @@
nextflow.enable.dsl=2
/*
-./nextflow src/solution_RNASeq_DSL2.nf --fastq "data/tiny_dataset/fastq/tiny2_R{1,2}.fastq.gz" --fasta "data/tiny_dataset/fasta/tiny_v2_10.fasta" --bed "data/tiny_dataset/annot/tiny.bed" -profile docker
+./nextflow src/solution_RNASeq.nf --fastq "data/tiny_dataset/fastq/tiny2_R{1,2}.fastq.gz" --fasta "data/tiny_dataset/fasta/tiny_v2_10.fasta" --bed "data/tiny_dataset/annot/tiny.bed" -profile docker
*/
log.info "fastq files : ${params.fastq}"
--
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