profiles { docker { docker.temp = 'auto' docker.enabled = true process { $create_annot { container = "ribowave:1.0" } $determination_P_site { container = "ribowave:1.0" } } } sge { process{ $create_annot { beforeScript = "" executor = "" cpus = 1 memory = "" time = "" queueSize = 1000 pollInterval = '' queue = '' penv = '' } } } }